RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 DDX49Q9Y6V7 483 aaKnown RBP15.62■□□□□ 0.09
CTSA-213ENST00000606782 RAG1P15918 1043 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 EDNRBP24530 442 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 ASPRV1Q53RT3 343 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 RNF207Q6ZRF8 634 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 Q7L0L9 218 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 TLK2Q86UE8 772 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 FBXO16Q8IX29 292 aaPredicted RBP15.61■□□□□ 0.09
CTSA-213ENST00000606782 DNERQ8NFT8 737 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 ESYT1Q9BSJ8 1104 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 KAT14Q9H8E8 782 aa15.61■□□□□ 0.09
CTSA-213ENST00000606782 TIMP1P01033 207 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 CD4P01730 458 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 GOLGA8HP0CJ92 632 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 EPHB4P54760 987 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 RPS6P62753 249 aaKnown RBP15.6■□□□□ 0.09
CTSA-213ENST00000606782 BEX3Q00994 111 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 FSCN1Q16658 493 aaKnown RBP15.6■□□□□ 0.09
CTSA-213ENST00000606782 DUSP28Q4G0W2 176 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 CASC1Q6TDU7 716 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 SLC30A10Q6XR72 485 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 FAM126BQ8IXS8 530 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 UBA5Q9GZZ9 404 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 AP5M1Q9H0R1 490 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 STXBP5LQ9Y2K9 1186 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 TNKSO95271 1327 aa15.6■□□□□ 0.09
CTSA-213ENST00000606782 PTPDC1A2A3K4 754 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 DYNC1LI2O43237 492 aaPredicted RBP15.59■□□□□ 0.09
CTSA-213ENST00000606782 ZEB2O60315 1214 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 SMAD3P84022 425 aaKnown RBP15.59■□□□□ 0.09
CTSA-213ENST00000606782 FPGSQ05932 587 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 SEC23AQ15436 765 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 TMEM63BQ5T3F8 832 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 CXCL17Q6UXB2 119 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 NOL8Q76FK4 1167 aaKnown RBP15.59■□□□□ 0.09
CTSA-213ENST00000606782 EEPD1Q7L9B9 569 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 ADGRF4Q8IZF3 695 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 VTI1AQ96AJ9 217 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 GRIN2DO15399 1336 aa15.59■□□□□ 0.09
CTSA-213ENST00000606782 CALML3P27482 149 aa15.58■□□□□ 0.08
CTSA-213ENST00000606782 MFSD5Q6N075 450 aa15.58■□□□□ 0.08
CTSA-213ENST00000606782 UBAC1Q9BSL1 405 aa15.58■□□□□ 0.08
CTSA-213ENST00000606782 WDR11Q9BZH6 1224 aa15.58■□□□□ 0.08
CTSA-213ENST00000606782 CPVLQ9H3G5 476 aa15.58■□□□□ 0.08
CTSA-213ENST00000606782 B4DLN1 442 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 NKRFO15226 690 aaKnown RBP eCLIP15.57■□□□□ 0.08
CTSA-213ENST00000606782 TLR3O15455 904 aaKnown RBP15.57■□□□□ 0.08
CTSA-213ENST00000606782 CYP21A2P08686 494 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 PARP1P09874 1014 aaKnown RBP15.57■□□□□ 0.08
CTSA-213ENST00000606782 PTGS1P23219 599 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 MRPL12P52815 198 aaKnown RBP15.57■□□□□ 0.08
CTSA-213ENST00000606782 CDC37Q16543 378 aaPredicted RBP15.57■□□□□ 0.08
CTSA-213ENST00000606782 CYB5R4Q7L1T6 521 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 MAP4K1Q92918 833 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 MTMR8Q96EF0 704 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 MPHOSPH6Q99547 160 aaKnown RBP15.57■□□□□ 0.08
CTSA-213ENST00000606782 JMJD4Q9H9V9 463 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
CTSA-213ENST00000606782 ABCB11O95342 1321 aa15.57■□□□□ 0.08
CTSA-213ENST00000606782 GHRHRQ02643 423 aa15.56■□□□□ 0.08
CTSA-213ENST00000606782 PTH1RQ03431 593 aa15.56■□□□□ 0.08
CTSA-213ENST00000606782 ITGA7Q13683 1181 aa15.56■□□□□ 0.08
CTSA-213ENST00000606782 QRICH1Q2TAL8 776 aa15.56■□□□□ 0.08
CTSA-213ENST00000606782 IFIT1BQ5T764 474 aaKnown RBP15.56■□□□□ 0.08
CTSA-213ENST00000606782 SCFD2Q8WU76 684 aa15.56■□□□□ 0.08
CTSA-213ENST00000606782 LSG1Q9H089 658 aaKnown RBP15.56■□□□□ 0.08
CTSA-213ENST00000606782 LAMA2P24043 3122 aaKnown RBP15.55■□□□□ 0.08
CTSA-213ENST00000606782 PALM3A6NDB9 673 aaPredicted RBP15.55■□□□□ 0.08
CTSA-213ENST00000606782 PDE4DQ08499 809 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 PPIGQ13427 754 aaKnown RBP eCLIP15.55■□□□□ 0.08
CTSA-213ENST00000606782 USH1GQ495M9 461 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 C16orf59Q7L2K0 433 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 MCF2L2Q86YR7 1114 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 STAG2Q8N3U4 1231 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 SYTL5Q8TDW5 730 aaPredicted RBP15.55■□□□□ 0.08
CTSA-213ENST00000606782 TBC1D5Q92609 795 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 GUCD1Q96NT3 240 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 POLR3EQ9NVU0 708 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 MRPL11Q9Y3B7 192 aaKnown RBP15.55■□□□□ 0.08
CTSA-213ENST00000606782 COL6A3P12111 3177 aa15.55■□□□□ 0.08
CTSA-213ENST00000606782 A6NJR5 290 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 KLRF2D3W0D1 207 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 CPT1AP50416 773 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 PURAQ00577 322 aaKnown RBP15.54■□□□□ 0.08
CTSA-213ENST00000606782 TRDNQ13061 729 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 ZNF697Q5TEC3 545 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 CCDC62Q6P9F0 684 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 FBXO11Q86XK2 927 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 TMEM199Q8N511 208 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 SAMD3Q8N6K7 520 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 RNPC3Q96LT9 517 aaKnown RBP15.54■□□□□ 0.08
CTSA-213ENST00000606782 IWS1Q96ST2 819 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 SEMA6BQ9H3T3 888 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 MAP3K20Q9NYL2 800 aaKnown RBP15.54■□□□□ 0.08
CTSA-213ENST00000606782 MAD2L2Q9UI95 211 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 CUL9Q8IWT3 2517 aa15.54■□□□□ 0.08
CTSA-213ENST00000606782 SCN10AQ9Y5Y9 1956 aa15.53■□□□□ 0.08
CTSA-213ENST00000606782 TMEM265A0A087WTH1 108 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms