RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 TLR10Q9BXR5 811 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 SH2D4AQ9H788 454 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
RER1-209ENST00000605895 WDR19Q8NEZ3 1342 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 STK36Q9NRP7 1315 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 PPP1R7Q15435 360 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 IFT20Q8IY31 132 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 UBLCP1Q8WVY7 318 aaPredicted RBP17.11■□□□□ 0.33
RER1-209ENST00000605895 GPKOWQ92917 476 aaPredicted RBP eCLIP17.11■□□□□ 0.33
RER1-209ENST00000605895 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
RER1-209ENST00000605895 ANO9A1A5B4 782 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
RER1-209ENST00000605895 DNM2P50570 870 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 BIRC2Q13490 618 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 IFNL2Q8IZJ0 200 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 GOLGA6L10A6NI86 522 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 PSMA7O14818 248 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 FAM107AO95990 144 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 CCNHP51946 323 aaPredicted RBP17.1■□□□□ 0.33
RER1-209ENST00000605895 ZBED6P86452 979 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 ALS2CR12Q96Q35 445 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 AP1M1Q9BXS5 423 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 ABCF2Q9UG63 623 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 LEMD3Q9Y2U8 911 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 CIAO1O76071 339 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 GCFC2P16383 781 aaKnown RBP17.1■□□□□ 0.33
RER1-209ENST00000605895 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 CPLX4Q7Z7G2 160 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 TTLL11Q8NHH1 800 aa17.1■□□□□ 0.33
RER1-209ENST00000605895 TACO1Q9BSH4 297 aaKnown RBP17.1■□□□□ 0.33
RER1-209ENST00000605895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■□□□□ 9.4
RER1-209ENST00000605895 NOVA2Q9UNW9 492 aaKnown RBP17.1■□□□□ 0.33
RER1-209ENST00000605895 LRRC53A6NM62 1247 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 SRGNP10124 158 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 STK4Q13043 487 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 FNBP4Q8N3X1 1017 aaPredicted RBP17.09■□□□□ 0.33
RER1-209ENST00000605895 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 DUSP9Q99956 384 aaKnown RBP17.09■□□□□ 0.33
RER1-209ENST00000605895 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 CARD10Q9BWT7 1032 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 KRT23Q9C075 422 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 CNOT8Q9UFF9 292 aaKnown RBP17.09■□□□□ 0.33
RER1-209ENST00000605895 PLEKHG1Q9ULL1 1385 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 SATB1Q01826 763 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 ITGB3BPQ13352 177 aaPredicted RBP17.09■□□□□ 0.33
RER1-209ENST00000605895 MEA1Q16626 185 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
RER1-209ENST00000605895 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.33
RER1-209ENST00000605895 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.33
RER1-209ENST00000605895 RAD51CO43502 376 aa17.08■□□□□ 0.33
RER1-209ENST00000605895 PALMO75781 387 aa17.08■□□□□ 0.33
RER1-209ENST00000605895 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.33
RER1-209ENST00000605895 FLT3P36888 993 aa17.08■□□□□ 0.33
RER1-209ENST00000605895 PDE4DQ08499 809 aa17.08■□□□□ 0.33
RER1-209ENST00000605895 LPIN2Q92539 896 aa17.08■□□□□ 0.33
RER1-209ENST00000605895 LTN1O94822 1766 aa17.08■□□□□ 0.33
RER1-209ENST00000605895 GMNCA6NCL1 334 aa17.08■□□□□ 0.32
RER1-209ENST00000605895 ENO4A6NNW6 628 aa17.08■□□□□ 0.32
RER1-209ENST00000605895 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
RER1-209ENST00000605895 SCTRP47872 440 aa17.08■□□□□ 0.32
RER1-209ENST00000605895 FAM133BQ5BKY9 247 aaKnown RBP17.08■□□□□ 0.32
RER1-209ENST00000605895 UHMK1Q8TAS1 419 aaKnown RBP17.08■□□□□ 0.32
RER1-209ENST00000605895 LRRC15Q8TF66 581 aa17.08■□□□□ 0.32
RER1-209ENST00000605895 SEC16BQ96JE7 1060 aa17.08■□□□□ 0.32
RER1-209ENST00000605895 AFDNP55196 1824 aaKnown RBP17.08■□□□□ 0.32
RER1-209ENST00000605895 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 GCKP35557 465 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 PAK2Q13177 524 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 KLHDC7AQ5VTJ3 777 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 TBC1D1Q86TI0 1168 aaPredicted RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 TRIM6Q9C030 488 aaPredicted RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 TCRBV5S4A2TA0A5A2 114 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 EME2A4GXA9 379 aaPredicted RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 UBE3CQ15386 1083 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 NBPF9Q3BBW0 867 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 FAM47AQ5JRC9 791 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 TEX11Q8IYF3 940 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
RER1-209ENST00000605895 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 UBA7P41226 1012 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 ASIC1P78348 528 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 ANKRD20A8PQ5CZ79 823 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 IFIT1BQ5T764 474 aaKnown RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
RER1-209ENST00000605895 TMEM60Q9H2L4 133 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
RER1-209ENST00000605895 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms