RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 ADM5C9JUS6 153 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 PLA2G6O60733 806 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 TXLNAP40222 546 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 MTMR9Q96QG7 549 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 DDX25Q9UHL0 483 aaKnown RBP21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 PPP2R3BQ9Y5P8 575 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 CFBP00751 764 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 FCHSD1Q86WN1 690 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 LPAR1Q92633 364 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 PDLIM2Q96JY6 352 aa21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 NAT10Q9H0A0 1025 aaKnown RBP21.72■■□□□ 1.07
TUBB4B-202ENST00000604929 SPDYE3A6NKU9 549 aa21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 BECN2A8MW95 431 aa21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 WDR46O15213 610 aaKnown RBP21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 E2F4Q16254 413 aa21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 PPP4R3AQ6IN85 833 aa21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 SULF1Q8IWU6 871 aa21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 DHX40Q8IX18 779 aaKnown RBP21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 PRPF38AQ8NAV1 312 aaKnown RBP21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 ZNF280CQ8ND82 737 aa21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 AGBL1Q96MI9 1066 aa21.71■■□□□ 1.07
TUBB4B-202ENST00000604929 GOLGA6L19H0YKK7 550 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 USP2O75604 605 aaPredicted RBP21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 VCAM1P19320 739 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 BACE1P56817 501 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 LDHDQ86WU2 507 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 CPXCR1Q8N123 301 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 SMARCE1Q969G3 411 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 TRIM44Q96DX7 344 aaPredicted RBP21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 SLF1Q9BQI6 1058 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 MARCH6O60337 910 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 FLOT1O75955 427 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 ORC2Q13416 577 aaPredicted RBP21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 AOPEPQ8N6M6 819 aa21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 RPAP3Q9H6T3 665 aaPredicted RBP21.7■■□□□ 1.06
TUBB4B-202ENST00000604929 MYH7BA7E2Y1 1941 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 BMP6P22004 513 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 AP3B2Q13367 1082 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 RRAGBQ5VZM2 374 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 SH3RF1Q7Z6J0 888 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 CCDC34Q96HJ3 373 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 WDR18Q9BV38 432 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 BLZF1Q9H2G9 400 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 AS3MTQ9HBK9 375 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 DISC1Q9NRI5 854 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 MAN1B1Q9UKM7 699 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 SSC5DA1L4H1 1573 aa21.69■■□□□ 1.06
TUBB4B-202ENST00000604929 STAT6P42226 847 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 SARSP49591 514 aaKnown RBP21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 USP11P51784 963 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 USP14P54578 494 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 HMGCS2P54868 508 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 ARHGAP4P98171 946 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 PDXDC2PQ6P474 469 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 TTC12Q9H892 705 aaPredicted RBP21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 PITPNM2Q9BZ72 1349 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 TRAF1Q13077 416 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 KRT26Q7Z3Y9 468 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 CABP7Q86V35 215 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 HAS1Q92839 578 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 MTRQ99707 1265 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 CCPG1Q9ULG6 757 aa21.68■■□□□ 1.06
TUBB4B-202ENST00000604929 ZNF536O15090 1300 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 NT5DC1Q5TFE4 455 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 IGSF22Q8N9C0 903 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 AK8Q96MA6 479 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 CCSER1Q9C0I3 900 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 LRWD1Q9UFC0 647 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 MRPL11Q9Y3B7 192 aaKnown RBP21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 POTEMA6NI47 508 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 FOSP01100 380 aaPredicted RBP21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 NAALADL2Q58DX5 795 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.67■■□□□ 1.066e-16■■□□□ 11.6
TUBB4B-202ENST00000604929 PYM1Q9BRP8 204 aaKnown RBP21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 RAVER2Q9HCJ3 691 aaKnown RBP21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 CCDC39Q9UFE4 941 aa21.67■■□□□ 1.06
TUBB4B-202ENST00000604929 GCOM1H8Y6P7 765 aaPredicted RBP21.66■■□□□ 1.06
TUBB4B-202ENST00000604929 PIK3CDO00329 1044 aa21.66■■□□□ 1.06
TUBB4B-202ENST00000604929 SMC2O95347 1197 aa21.66■■□□□ 1.06
TUBB4B-202ENST00000604929 POLR2MP0CAP2 368 aa21.66■■□□□ 1.06
TUBB4B-202ENST00000604929 EPHX2P34913 555 aa21.66■■□□□ 1.06
TUBB4B-202ENST00000604929 ICAM1P05362 532 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 GCFC2P16383 781 aaKnown RBP21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 DPYDQ12882 1025 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 CUL4BQ13620 913 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 TMEM266Q2M3C6 531 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 PRR16Q569H4 304 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 SPATA20Q8TB22 786 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 LRRC15Q8TF66 581 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 CRYGNQ8WXF5 182 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 MMTAG2Q9BU76 263 aaKnown RBP21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 PCDHA12Q9UN75 941 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 FXR2P51116 673 aaKnown RBP eCLIP21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 UBXN2AP68543 259 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 EAPPQ56P03 285 aaPredicted RBP21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 MCTP2Q6DN12 878 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 CYP2W1Q8TAV3 490 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 HOMER2Q9NSB8 354 aa21.65■■□□□ 1.06
TUBB4B-202ENST00000604929 DOCK1Q14185 1865 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms