RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 RASGRP4Q8TDF6 673 aa16.97■□□□□ 0.31
LYSMD4-211ENST00000604213 CICQ96RK0 1608 aaPredicted RBP16.97■□□□□ 0.31
LYSMD4-211ENST00000604213 CXCR5P32302 372 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 KIF11P52732 1056 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 EVX2Q03828 476 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 NNTQ13423 1086 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 CNPY4Q8N129 248 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 ZIM3Q96PE6 472 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 RUFY1Q96T51 708 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 MYCBPQ99417 103 aaPredicted RBP16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 PCDHA4Q9UN74 947 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 M0R2N6 131 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 ORC4O43929 436 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 EIF4A3P38919 411 aaKnown RBP16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 STK4Q13043 487 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 FKBP15Q5T1M5 1219 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 DZIP3Q86Y13 1208 aaKnown RBP16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 IQCDQ96DY2 449 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 PSMB7Q99436 277 aa16.96■□□□□ 0.31
LYSMD4-211ENST00000604213 NDUFAB1O14561 156 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 EPHB6O15197 1021 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 NCK2O43639 380 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 FAM47AQ5JRC9 791 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 SUSD4Q5VX71 490 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 B4GALNT4Q76KP1 1039 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 SH2D3CQ8N5H7 860 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 GPKOWQ92917 476 aaPredicted RBP eCLIP16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 SIK3Q9Y2K2 1263 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 USP17L12C9JPN9 530 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 USP17L21D6R901 530 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 FNTAP49354 379 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 PDE4DQ08499 809 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 ALS2CR12Q96Q35 445 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 SH3GLB2Q9NR46 395 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 RBM12Q9NTZ6 932 aaKnown RBP16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
LYSMD4-211ENST00000604213 ZNF804BA4D1E1 1349 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 CHRNDQ07001 517 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 C8orf74Q6P047 294 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 IQCKQ8N0W5 287 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 TLR10Q9BXR5 811 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 CUEDC2Q9H467 287 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 FLT1P17948 1338 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 LOC102724159A0A0B4J2E5 919 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 PJA2O43164 708 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 FCER1AP12319 257 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 PLCG1P19174 1290 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 IGHMBP2P38935 993 aaKnown RBP16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 PAFAH1B1P43034 410 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 PWP2Q15269 919 aaKnown RBP16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 GLE1Q53GS7 698 aaKnown RBP16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 CCDC178Q5BJE1 867 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 KDM7AQ6ZMT4 941 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 CCDC91Q7Z6B0 441 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 MAGEF1Q9HAY2 307 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 DCCP43146 1447 aa16.94■□□□□ 0.3
LYSMD4-211ENST00000604213 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 COL1A1P02452 1464 aaPredicted RBP16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 CCDC194A0A1B0GVG4 234 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 ATP1A2P50993 1020 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 GSCP56915 257 aaPredicted RBP16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 KCTD16Q68DU8 428 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 C7orf25Q9BPX7 421 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 GDF3Q9NR23 364 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 PCDHA6Q9UN73 950 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 PCDHA8Q9Y5H6 950 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 RREB1Q92766 1687 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 ZNF233A6NK53 670 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 AKR1B10O60218 316 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 ZEB2O60315 1214 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 KRT14P02533 472 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 MAGEA1P43355 309 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 VWA3BQ502W6 1294 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 EMC10Q5UCC4 262 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 FAM207AQ9NSI2 230 aaPredicted RBP16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 CAPN7Q9Y6W3 813 aa16.93■□□□□ 0.3
LYSMD4-211ENST00000604213 MYH10P35580 1976 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 FSBPO95073 299 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 GLI1P08151 1106 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 FAM153BP0C7A2 387 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 KIF5BP33176 963 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 USP8P40818 1118 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 PRPHP41219 470 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 PPP1R2P41236 205 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 GYG1P46976 350 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 CARSP49589 748 aaKnown RBP16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 MNAT1P51948 309 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 ASIC1P78348 528 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 INF2Q27J81 1249 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 FAM153CQ494X1 144 aa16.92■□□□□ 0.3
LYSMD4-211ENST00000604213 KLHDC7AQ5VTJ3 777 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms