RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 DHX32Q7L7V1 743 aaKnown RBP13.4□□□□□ -0.26
CCDC12-209ENST00000604164 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
CCDC12-209ENST00000604164 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
CCDC12-209ENST00000604164 SPZ1Q9BXG8 430 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 AP5M1Q9H0R1 490 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
CCDC12-209ENST00000604164 PHF24Q9UPV7 400 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 FRMPD3Q5JV73 1810 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 SYNRGQ9UMZ2 1314 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
CCDC12-209ENST00000604164 ADCYAP1R1P41586 468 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 GJA9P57773 515 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 FGD1P98174 961 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 SGMS1Q86VZ5 419 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 KATNBL1Q9H079 304 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 UPF3AQ9H1J1 476 aaKnown RBP13.39□□□□□ -0.27
CCDC12-209ENST00000604164 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 PRKAG2Q9UGJ0 569 aa13.39□□□□□ -0.27
CCDC12-209ENST00000604164 NKRFO15226 690 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC12-209ENST00000604164 ADAMTS4O75173 837 aa13.38□□□□□ -0.27
CCDC12-209ENST00000604164 PSMA5P28066 241 aa13.38□□□□□ -0.27
CCDC12-209ENST00000604164 HSPA4P34932 840 aa13.38□□□□□ -0.27
CCDC12-209ENST00000604164 NKX3-2P78367 333 aa13.38□□□□□ -0.27
CCDC12-209ENST00000604164 SLC39A5Q6ZMH5 540 aa13.38□□□□□ -0.27
CCDC12-209ENST00000604164 KLHDC9Q8NEP7 349 aa13.38□□□□□ -0.27
CCDC12-209ENST00000604164 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
CCDC12-209ENST00000604164 ASTN1O14525 1302 aa13.38□□□□□ -0.27
CCDC12-209ENST00000604164 CABYRO75952 493 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 CFBP00751 764 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 EDNRBP24530 442 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 ACLYP53396 1101 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 RCAN1P53805 252 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-209ENST00000604164 RTP1P59025 263 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 GHRHRQ02643 423 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 KCNA10Q16322 511 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 BRDTQ58F21 947 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-209ENST00000604164 GNASQ5JWF2 1037 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 ARHGEF16Q5VV41 709 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 EEPD1Q7L9B9 569 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 TLK2Q86UE8 772 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-209ENST00000604164 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 SYTL5Q8TDW5 730 aaPredicted RBP13.37□□□□□ -0.27
CCDC12-209ENST00000604164 SCFD2Q8WU76 684 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 KCNB2Q92953 911 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 PIGSQ96S52 555 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 RMDN3Q96TC7 470 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 SEZ6LQ9BYH1 1024 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 GNEQ9Y223 722 aaKnown RBP13.37□□□□□ -0.27
CCDC12-209ENST00000604164 ELP1O95163 1332 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 MROH7Q68CQ1 1323 aa13.37□□□□□ -0.27
CCDC12-209ENST00000604164 A0A1W2PPC1 479 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 A0A1W2PQ45 241 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-209ENST00000604164 A0A1W2PQY0 241 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 GCOM1H8Y6P7 765 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-209ENST00000604164 POLR2MP0CAP2 368 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 HSD17B4P51659 736 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
CCDC12-209ENST00000604164 SNX17Q15036 470 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 STXBP2Q15833 593 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 DUSP28Q4G0W2 176 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 BLOC1S2Q6QNY1 142 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 CUL5Q93034 780 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 LENG1Q96BZ8 264 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-209ENST00000604164 PURBQ96QR8 312 aaKnown RBP13.36□□□□□ -0.27
CCDC12-209ENST00000604164 LBHD1Q9BQE6 289 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-209ENST00000604164 MYL10Q9BUA6 226 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 WDR11Q9BZH6 1224 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
CCDC12-209ENST00000604164 SMCHD1A6NHR9 2005 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 CCDC196A0A1B0GTZ2 297 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 RBM47A0AV96 593 aaKnown RBP13.35□□□□□ -0.27
CCDC12-209ENST00000604164 DYNC1LI2O43237 492 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-209ENST00000604164 ZBTB43O43298 467 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 CYTH3O43739 400 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 SMPD1P17405 629 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 CPT1AP50416 773 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 TTLL4Q14679 1199 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 FSCN1Q16658 493 aaKnown RBP13.35□□□□□ -0.27
CCDC12-209ENST00000604164 CCSAPQ6IQ19 270 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-209ENST00000604164 APOA5Q6Q788 366 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 CHRDL2Q6WN34 429 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 VTI1AQ96AJ9 217 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
CCDC12-209ENST00000604164 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
CCDC12-209ENST00000604164 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-209ENST00000604164 ZMYND8Q9ULU4 1186 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms