RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 CORO7P57737 925 aa7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 RBM10P98175 930 aaKnown RBP7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 SCUBE1Q8IWY4 988 aa7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 NUP43Q8NFH3 380 aa7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 FAM168AQ92567 244 aa7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 DIO2Q92813 273 aa7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 ASIC4Q96FT7 647 aa7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
UBE2E3-212ENST00000602888 TRBV23-1A0A0A0MS06 115 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 NPHS1O60500 1241 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 LTBRP36941 435 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 TESK1Q15569 626 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 FAM209AQ5JX71 171 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 FOXB2Q5VYV0 432 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 MBLAC2Q68D91 279 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 MCTP1Q6DN14 999 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 DENND5AQ6IQ26 1287 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 NOP9Q86U38 636 aaKnown RBP7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 CCDC103Q8IW40 242 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 ZSWIM2Q8NEG5 633 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 SH3TC2Q8TF17 1288 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 SHISA4Q96DD7 197 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 CRTAC1Q9NQ79 661 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 TMEFF2Q9UIK5 374 aaPredicted RBP7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 ACSL6Q9UKU0 697 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 YBX2Q9Y2T7 364 aaKnown RBP7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 PTCH2Q9Y6C5 1203 aa7.19□□□□□ -1.26
UBE2E3-212ENST00000602888 C7orf72A4D263 438 aa7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 GALK1P51570 392 aa7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 SUMO1P63165 101 aaKnown RBP7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 KIR3DS1Q14943 382 aa7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 USP53Q70EK8 1073 aa7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 SIRT2Q8IXJ6 389 aa7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 EXOC2Q96KP1 924 aa7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 SLC6A17Q9H1V8 727 aa7.18□□□□□ -1.26
UBE2E3-212ENST00000602888 PNLIPP16233 465 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 ARL4AP40617 200 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 CYP4F8P98187 520 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 MVKQ03426 396 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 INF2Q27J81 1249 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 NLGN2Q8NFZ4 835 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 DHRS4Q9BTZ2 278 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 PDLIM7Q9NR12 457 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 MRPS23Q9Y3D9 190 aaKnown RBP7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 NPFFR2Q9Y5X5 522 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 CARMIL2Q6F5E8 1435 aa7.17□□□□□ -1.26
UBE2E3-212ENST00000602888 A0A1W2PQJ5 194 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 ARNTLO00327 626 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 MYO1BO43795 1136 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 MSL3P1P0C860 447 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 NTRK3Q16288 839 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 MPZL3Q6UWV2 235 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 DCAF4Q8WV16 495 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 INTS4Q96HW7 963 aaKnown RBP7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 RNPC3Q96LT9 517 aaKnown RBP7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
UBE2E3-212ENST00000602888 BLACEA4D250 179 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 TACR1P25103 407 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 RPL11P62913 178 aaKnown RBP7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 RSPO2Q6UXX9 243 aaPredicted RBP7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 LZTR1Q8N653 840 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 RCBTB1Q8NDN9 531 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 KISS1RQ969F8 398 aaPredicted RBP7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 LIN37Q96GY3 246 aaPredicted RBP7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 PHF20Q9BVI0 1012 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 KANSL2Q9H9L4 492 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 GPR27Q9NS67 375 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 RWDD3Q9Y3V2 267 aa7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 TIMM13Q9Y5L4 95 aaPredicted RBP7.15□□□□□ -1.26
UBE2E3-212ENST00000602888 CCDC163A0A0D9SF12 145 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 LCP1P13796 627 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 PDE6BP35913 854 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 GTF2A2P52657 109 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 SQSTM1Q13501 440 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 ADGRF1Q5T601 910 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 STYK1Q6J9G0 422 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 JAZF1Q86VZ6 243 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 IRF2BP1Q8IU81 584 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 DPF3Q92784 378 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 TNFRSF12AQ9NP84 129 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 BTG4Q9NY30 223 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 PCDHA2Q9Y5H9 948 aa7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 MRPL42Q9Y6G3 142 aaKnown RBP7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
UBE2E3-212ENST00000602888 ERVFRD-1P60508 538 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 BICRALQ6AI39 1079 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 KCNT2Q6UVM3 1135 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 MAMDC2Q7Z304 686 aaPredicted RBP7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 CABP7Q86V35 215 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 USP33Q8TEY7 942 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 PTPRN2Q92932 1015 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 ZFYVE21Q9BQ24 234 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 MTA3Q9BTC8 594 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 TMEM260Q9NX78 707 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 FAM53CQ9NYF3 392 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.13□□□□□ -1.272e-6■■■□□ 16.4
UBE2E3-212ENST00000602888 MARCH2Q9P0N8 246 aa7.13□□□□□ -1.27
UBE2E3-212ENST00000602888 ESYT3A0FGR9 886 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms