RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 HSD17B4P51659 736 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 CNTN2Q02246 1040 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 SCRN1Q12765 414 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 STK3Q13188 491 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 ZSCAN31Q96LW9 406 aaPredicted RBP16.02■□□□□ 0.16
RNF40-212ENST00000602784 TINF2Q9BSI4 451 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 FLRT1Q9NZU1 646 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 ADD3Q9UEY8 706 aaKnown RBP16.02■□□□□ 0.16
RNF40-212ENST00000602784 NRBP1Q9UHY1 535 aa16.02■□□□□ 0.16
RNF40-212ENST00000602784 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 hCG_1642624A0A1W2PR95 340 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 SOWAHBA6NEL2 793 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 AKAP17AQ02040 695 aaKnown RBP16.01■□□□□ 0.15
RNF40-212ENST00000602784 PFKFB3Q16875 520 aaPredicted RBP16.01■□□□□ 0.15
RNF40-212ENST00000602784 PPP1R18Q6NYC8 613 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 TRIM22Q8IYM9 498 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 DNERQ8NFT8 737 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 GTF3C6Q969F1 213 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 FGD4Q96M96 766 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 PLXNA1Q9UIW2 1896 aa16.01■□□□□ 0.15
RNF40-212ENST00000602784 ASB14A6NK59 587 aa16■□□□□ 0.15
RNF40-212ENST00000602784 PIK3CDO00329 1044 aa16■□□□□ 0.15
RNF40-212ENST00000602784 SCG2P13521 617 aa16■□□□□ 0.15
RNF40-212ENST00000602784 CALML3P27482 149 aa16■□□□□ 0.15
RNF40-212ENST00000602784 MCM2P49736 904 aa16■□□□□ 0.15
RNF40-212ENST00000602784 CACNB2Q08289 660 aaPredicted RBP16■□□□□ 0.15
RNF40-212ENST00000602784 SSRP1Q08945 709 aaKnown RBP16■□□□□ 0.15
RNF40-212ENST00000602784 PKN1Q16512 942 aa16■□□□□ 0.15
RNF40-212ENST00000602784 WWC2Q6AWC2 1192 aa16■□□□□ 0.15
RNF40-212ENST00000602784 SLC30A10Q6XR72 485 aa16■□□□□ 0.15
RNF40-212ENST00000602784 HEATR3Q7Z4Q2 680 aa16■□□□□ 0.15
RNF40-212ENST00000602784 SYTL5Q8TDW5 730 aaPredicted RBP16■□□□□ 0.15
RNF40-212ENST00000602784 MORC4Q8TE76 937 aa16■□□□□ 0.15
RNF40-212ENST00000602784 TBC1D5Q92609 795 aa16■□□□□ 0.15
RNF40-212ENST00000602784 PHKBQ93100 1093 aa16■□□□□ 0.15
RNF40-212ENST00000602784 SH2B1Q9NRF2 756 aaPredicted RBP16■□□□□ 0.15
RNF40-212ENST00000602784 BARHL2Q9NY43 387 aa16■□□□□ 0.15
RNF40-212ENST00000602784 RPTORQ8N122 1335 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 B4DLN1 442 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
RNF40-212ENST00000602784 CFBP00751 764 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
RNF40-212ENST00000602784 CYP2C19P33261 490 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 MRPL12P52815 198 aaKnown RBP15.99■□□□□ 0.15
RNF40-212ENST00000602784 NOL8Q76FK4 1167 aaKnown RBP15.99■□□□□ 0.15
RNF40-212ENST00000602784 FAM177A1Q8N128 213 aaPredicted RBP15.99■□□□□ 0.15
RNF40-212ENST00000602784 SLC26A6Q9BXS9 759 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 GLT8D2Q9H1C3 349 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
RNF40-212ENST00000602784 ASTN1O14525 1302 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 RBBP6Q7Z6E9 1792 aaKnown RBP15.98■□□□□ 0.15
RNF40-212ENST00000602784 STXBP3O00186 592 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 DEXIO95424 95 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 LARGE1O95461 756 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 CCL5P13501 91 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 CAPN2P17655 700 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 TRIM32Q13049 653 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 NECAB1Q8N987 351 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 NSUN6Q8TEA1 469 aaKnown RBP15.98■□□□□ 0.15
RNF40-212ENST00000602784 CCDC12Q8WUD4 166 aaPredicted RBP15.98■□□□□ 0.15
RNF40-212ENST00000602784 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
RNF40-212ENST00000602784 MPHOSPH6Q99547 160 aaKnown RBP15.98■□□□□ 0.15
RNF40-212ENST00000602784 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
RNF40-212ENST00000602784 SH3GLB2Q9NR46 395 aa15.98■□□□□ 0.15
RNF40-212ENST00000602784 STK36Q9NRP7 1315 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 ESYT2A0FGR8 921 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 MEIS2O14770 477 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 CTDNEP1O95476 244 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 SNAI1O95863 264 aaPredicted RBP15.97■□□□□ 0.15
RNF40-212ENST00000602784 CYBAP13498 195 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 EDNRBP24530 442 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 ALDH5A1P51649 535 aaPredicted RBP15.97■□□□□ 0.15
RNF40-212ENST00000602784 NAPAP54920 295 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 MTFR1Q15390 333 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 ARMCX2Q7L311 632 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 CUL5Q93034 780 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 PURBQ96QR8 312 aaKnown RBP15.97■□□□□ 0.15
RNF40-212ENST00000602784 IWS1Q96ST2 819 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 RMDN3Q96TC7 470 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 ABHD16BQ9H3Z7 469 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 RIC8AQ9NPQ8 531 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 PAK6Q9NQU5 681 aaPredicted RBP15.97■□□□□ 0.15
RNF40-212ENST00000602784 COL20A1Q9P218 1284 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 CNPY2Q9Y2B0 182 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 LCTP09848 1927 aa15.97■□□□□ 0.15
RNF40-212ENST00000602784 HOXA13P31271 388 aaPredicted RBP15.96■□□□□ 0.15
RNF40-212ENST00000602784 TYW1BQ6NUM6 668 aa15.96■□□□□ 0.15
RNF40-212ENST00000602784 TAAR1Q96RJ0 339 aa15.96■□□□□ 0.15
RNF40-212ENST00000602784 LLPHQ9BRT6 129 aaKnown RBP15.96■□□□□ 0.15
RNF40-212ENST00000602784 TMEM106CQ9BVX2 250 aa15.96■□□□□ 0.15
RNF40-212ENST00000602784 ZMYND12Q9H0C1 365 aa15.96■□□□□ 0.15
RNF40-212ENST00000602784 RNF208Q9H0X6 261 aa15.96■□□□□ 0.15
RNF40-212ENST00000602784 UNC93B1Q9H1C4 597 aa15.96■□□□□ 0.15
RNF40-212ENST00000602784 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.96■□□□□ 0.15
RNF40-212ENST00000602784 CENPFP49454 3210 aa15.96■□□□□ 0.14
RNF40-212ENST00000602784 SMCO2A6NFE2 343 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 MSCO60682 206 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 GJB1P08034 283 aa15.95■□□□□ 0.14
RNF40-212ENST00000602784 ADCY7P51828 1080 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms