RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 COPB1P53618 953 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 MYL7Q01449 175 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 SLC39A2Q9NP94 309 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 ZMAT2Q96NC0 199 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 ARPP21Q9UBL0 812 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 ZNF518AQ6AHZ1 1483 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 EEF1DP29692 281 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 POLR2BP30876 1174 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 TCP10Q12799 353 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 PRPSAP1Q14558 356 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 MYH9P35579 1960 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 PALM3A6NDB9 673 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 POLD1P28340 1107 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 TMED2Q15363 201 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 ARMC9Q7Z3E5 817 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 EYA1Q99502 592 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 CPP00450 1065 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 ATICP31939 592 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 DHX9Q08211 1270 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 RAPH1Q70E73 1250 aa10.45□□□□□ -0.74
CSMD1-217ENST00000602723 METTL14Q9HCE5 456 aaKnown RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 SCHIP1Q9P0W5 487 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-217ENST00000602723 FAM133BQ5BKY9 247 aaKnown RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 MAML1Q92585 1016 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 ABCA5Q8WWZ7 1642 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 PGRMC1O00264 195 aaKnown RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 PFKFB2O60825 505 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 COL4A3BPQ9Y5P4 624 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 USP19O94966 1318 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 GPC4O75487 556 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 ATP5JP18859 108 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 CASP14P31944 242 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 ZBTB8OSQ8IWT0 167 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 USP28Q96RU2 1077 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 KIF24Q5T7B8 1368 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 STX1BP61266 288 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 ADAM9Q13443 819 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 GNGT2O14610 69 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 MAGOHBQ96A72 148 aaKnown RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 ATP8A2Q9NTI2 1148 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 JRKLQ9Y4A0 524 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 GJA3Q9Y6H8 435 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 ENC1O14682 589 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 HSPA8P11142 646 aaKnown RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 FAM47AQ5JRC9 791 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 CYP4F22Q6NT55 531 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 CCDC138Q96M89 665 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 MTMR6Q9Y217 621 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 HOXC9P31274 260 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 DEUP1Q05D60 604 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 TSTA3Q13630 321 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 TAF11Q15544 211 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 GALNT17Q6IS24 598 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 GDAP1Q8TB36 358 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 SUCLG2Q96I99 432 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 GCNT4Q9P109 453 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 SCINQ9Y6U3 715 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 CARMIL3Q8ND23 1372 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 HEXIM1O94992 359 aaKnown RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 UHRF1BP1Q6BDS2 1440 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 CNOT6LQ96LI5 555 aaKnown RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 PCDHA12Q9UN75 941 aa10.44□□□□□ -0.74
CSMD1-217ENST00000602723 SOS2Q07890 1332 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-217ENST00000602723 A0A0D9SFI3 127 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 TFAP4Q01664 338 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 GCKRQ14397 625 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 GPKOWQ92917 476 aaPredicted RBP eCLIP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 EPB41L5Q9HCM4 733 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ZMYM3Q14202 1370 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 SYNJ2BP-COX16A0A087WUM0 186 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ART3Q13508 389 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 COX16Q9P0S2 106 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ATP8B1O43520 1251 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 LRRC23Q53EV4 343 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 SLC35F6Q8N357 371 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ZC4H2Q9NQZ6 224 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 DISC1Q9NRI5 854 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 CDR2Q01850 454 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 KRT80Q6KB66 452 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.43□□□□□ -0.74
CSMD1-217ENST00000602723 TUBGCP2Q9BSJ2 902 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 HESX1Q9UBX0 185 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 PYCARDQ9ULZ3 195 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 DAAM1Q9Y4D1 1078 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 CABLES1Q8TDN4 633 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 IP6K1Q92551 441 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 EXOC4Q96A65 974 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ZBBXA8MT70 800 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 MCF2LO15068 1137 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 SCG2P13521 617 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 BPIFB4P59827 614 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 MESDQ14696 234 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 ANAPC5Q9UJX4 755 aa10.43□□□□□ -0.74
CSMD1-217ENST00000602723 DMRT2Q9Y5R5 561 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms