RNA–Protein interactions for RNA: ENST00000602439.5

SFXN2-205, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-205ENST00000602439 KATNBL1Q9H079 304 aa17.06■□□□□ 0.32
SFXN2-205ENST00000602439 UPF3AQ9H1J1 476 aaKnown RBP17.06■□□□□ 0.32
SFXN2-205ENST00000602439 STARD7Q9NQZ5 370 aa17.06■□□□□ 0.32
SFXN2-205ENST00000602439 MAP3K20Q9NYL2 800 aaKnown RBP17.06■□□□□ 0.32
SFXN2-205ENST00000602439 MAD2L2Q9UI95 211 aa17.06■□□□□ 0.32
SFXN2-205ENST00000602439 LCTP09848 1927 aa17.06■□□□□ 0.32
SFXN2-205ENST00000602439 MROH7Q68CQ1 1323 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 A0A1W2PQ45 241 aaPredicted RBP17.05■□□□□ 0.32
SFXN2-205ENST00000602439 A0A1W2PQY0 241 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 ZBTB5O15062 677 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 PRC1O43663 620 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 DDAH1O94760 285 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 SLC34A2O95436 690 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 CALM1P0DP23 149 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 CALM2P0DP24 149 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 CALM3P0DP25 149 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 EEPD1Q7L9B9 569 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 IGDCC4Q8TDY8 1250 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 VTI1AQ96AJ9 217 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
SFXN2-205ENST00000602439 GDF15Q99988 308 aa17.05■□□□□ 0.32
SFXN2-205ENST00000602439 ELP1O95163 1332 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 CABYRO75952 493 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
SFXN2-205ENST00000602439 GNAQP50148 359 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 NKX3-2P78367 333 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 TROAPQ12815 778 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 KRT32Q14532 448 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 TRIM60Q495X7 471 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 BRDTQ58F21 947 aaPredicted RBP17.04■□□□□ 0.32
SFXN2-205ENST00000602439 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 TLK2Q86UE8 772 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
SFXN2-205ENST00000602439 NSUN6Q8TEA1 469 aaKnown RBP17.04■□□□□ 0.32
SFXN2-205ENST00000602439 LZTS2Q9BRK4 669 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 UBE2OQ9C0C9 1292 aaKnown RBP17.04■□□□□ 0.32
SFXN2-205ENST00000602439 PRO3102Q9H379 93 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
SFXN2-205ENST00000602439 ASTN1O14525 1302 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 DCDC2CA8MYV0 355 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.32
SFXN2-205ENST00000602439 ASGR1P07306 291 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 LIFRP42702 1097 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 MAGEA10P43363 369 aaPredicted RBP17.03■□□□□ 0.32
SFXN2-205ENST00000602439 ANTXR2P58335 489 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 TAPT1Q6NXT6 567 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 ZNF654Q8IZM8 581 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 MTMR8Q96EF0 704 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 IWS1Q96ST2 819 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 SEZ6LQ9BYH1 1024 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 WDR11Q9BZH6 1224 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 RIOX1Q9H6W3 641 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 GNEQ9Y223 722 aaKnown RBP17.03■□□□□ 0.32
SFXN2-205ENST00000602439 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 LRRC37A2A6NM11 1700 aa17.03■□□□□ 0.32
SFXN2-205ENST00000602439 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.32
SFXN2-205ENST00000602439 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-205ENST00000602439 DYNC1LI2O43237 492 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-205ENST00000602439 CFBP00751 764 aa17.02■□□□□ 0.32
SFXN2-205ENST00000602439 DUSP28Q4G0W2 176 aa17.02■□□□□ 0.32
SFXN2-205ENST00000602439 CCSAPQ6IQ19 270 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-205ENST00000602439 SKAP1Q86WV1 359 aa17.02■□□□□ 0.32
SFXN2-205ENST00000602439 SCFD2Q8WU76 684 aa17.02■□□□□ 0.32
SFXN2-205ENST00000602439 TOX2Q96NM4 488 aa17.02■□□□□ 0.32
SFXN2-205ENST00000602439 PURBQ96QR8 312 aaKnown RBP17.02■□□□□ 0.32
SFXN2-205ENST00000602439 PRDM5Q9NQX1 630 aaPredicted RBP17.02■□□□□ 0.32
SFXN2-205ENST00000602439 BAZ2BQ9UIF8 2168 aaKnown RBP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 ADCY6O43306 1168 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 REC8O95072 547 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 HMGB1P09429 215 aaKnown RBP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 CLTBP09497 229 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 SMPD1P17405 629 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 EDNRBP24530 442 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 FXR1P51114 621 aaKnown RBP eCLIP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 TLE2Q04725 743 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 PPP2R5BQ15173 497 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 STXBP2Q15833 593 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 FSCN1Q16658 493 aaKnown RBP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 ARHGEF16Q5VV41 709 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 SYTL5Q8TDW5 730 aaPredicted RBP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 NEK1Q96PY6 1258 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 RMDN3Q96TC7 470 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 PDGFCQ9NRA1 345 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
SFXN2-205ENST00000602439 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
SFXN2-205ENST00000602439 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
SFXN2-205ENST00000602439 MYADML2A6NDP7 307 aa17■□□□□ 0.31
SFXN2-205ENST00000602439 SH2B2O14492 632 aaPredicted RBP17■□□□□ 0.31
SFXN2-205ENST00000602439 TLR3O15455 904 aaKnown RBP17■□□□□ 0.31
SFXN2-205ENST00000602439 CPT1AP50416 773 aa17■□□□□ 0.31
SFXN2-205ENST00000602439 MDM2Q00987 491 aaPredicted RBP17■□□□□ 0.31
SFXN2-205ENST00000602439 TTLL4Q14679 1199 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms