RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 BLOC1S2Q6QNY1 142 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 SYNE3Q6ZMZ3 975 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 MCF2L2Q86YR7 1114 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 RAB11FIP4Q86YS3 637 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 ARRDC4Q8NCT1 418 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 BRPF3Q9ULD4 1205 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
SSBP4-213ENST00000602088 DNM1LO00429 736 aa19.4■□□□□ 0.7
SSBP4-213ENST00000602088 OPLAHO14841 1288 aa19.4■□□□□ 0.7
SSBP4-213ENST00000602088 PLEKHA8P1O95397 391 aa19.4■□□□□ 0.7
SSBP4-213ENST00000602088 CCDC144BQ3MJ40 725 aa19.4■□□□□ 0.7
SSBP4-213ENST00000602088 SRBD1Q8N5C6 995 aaKnown RBP19.4■□□□□ 0.7
SSBP4-213ENST00000602088 DNERQ8NFT8 737 aa19.4■□□□□ 0.7
SSBP4-213ENST00000602088 XPNPEP3Q9NQH7 507 aa19.4■□□□□ 0.7
SSBP4-213ENST00000602088 RPS6KB1P23443 525 aa19.39■□□□□ 0.69
SSBP4-213ENST00000602088 GHRHRQ02643 423 aa19.39■□□□□ 0.69
SSBP4-213ENST00000602088 LRRC41Q15345 812 aa19.39■□□□□ 0.69
SSBP4-213ENST00000602088 GJC2Q5T442 439 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-213ENST00000602088 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
SSBP4-213ENST00000602088 FBXL16Q8N461 479 aa19.39■□□□□ 0.69
SSBP4-213ENST00000602088 SYTL5Q8TDW5 730 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-213ENST00000602088 DPF3Q92784 378 aa19.39■□□□□ 0.69
SSBP4-213ENST00000602088 RRP36Q96EU6 259 aaKnown RBP19.39■□□□□ 0.69
SSBP4-213ENST00000602088 DUSP11O75319 330 aaKnown RBP19.38■□□□□ 0.69
SSBP4-213ENST00000602088 CASTP20810 708 aaKnown RBP19.38■□□□□ 0.69
SSBP4-213ENST00000602088 HSD17B4P51659 736 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 FGD1P98174 961 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 Q6ZUG5 572 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 TMTC3Q6ZXV5 915 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 CMTR1Q8N1G2 835 aaKnown RBP19.38■□□□□ 0.69
SSBP4-213ENST00000602088 PIBF1Q8WXW3 757 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 LENG1Q96BZ8 264 aaPredicted RBP19.38■□□□□ 0.69
SSBP4-213ENST00000602088 AGXT2Q9BYV1 514 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 VTA1Q9NP79 307 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 COL20A1Q9P218 1284 aa19.38■□□□□ 0.69
SSBP4-213ENST00000602088 KLF18A0A0U1RQI7 1052 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 ZBTB43O43298 467 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 ADCY6O43306 1168 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 PGK1P00558 417 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 CFBP00751 764 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 EDNRBP24530 442 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 TAPT1Q6NXT6 567 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 SAMD3Q8N6K7 520 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 TAAR1Q96RJ0 339 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 MAP3K20Q9NYL2 800 aaKnown RBP19.37■□□□□ 0.69
SSBP4-213ENST00000602088 CEP290O15078 2479 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 LRRC37A2A6NM11 1700 aa19.37■□□□□ 0.69
SSBP4-213ENST00000602088 KBTBD13C9JR72 458 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 ADAMTS4O75173 837 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 ADCYAP1R1P41586 468 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 RCAN1P53805 252 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 TNFAIP2Q03169 654 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 PRPF38BQ5VTL8 546 aaKnown RBP19.36■□□□□ 0.69
SSBP4-213ENST00000602088 RUFY3Q7L099 469 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 EEPD1Q7L9B9 569 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 RNF180Q86T96 592 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 FBXO16Q8IX29 292 aaPredicted RBP19.36■□□□□ 0.69
SSBP4-213ENST00000602088 CCDC82Q8N4S0 544 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 BRF1Q92994 677 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 MPHOSPH6Q99547 160 aaKnown RBP19.36■□□□□ 0.69
SSBP4-213ENST00000602088 TM6SF1Q9BZW5 370 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 SENP6Q9GZR1 1112 aaPredicted RBP19.36■□□□□ 0.69
SSBP4-213ENST00000602088 PDGFCQ9NRA1 345 aa19.36■□□□□ 0.69
SSBP4-213ENST00000602088 RBM28Q9NW13 759 aaKnown RBP19.36■□□□□ 0.69
SSBP4-213ENST00000602088 SYNRGQ9UMZ2 1314 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-213ENST00000602088 B4DLN1 442 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 MYCNP04198 464 aaPredicted RBP19.35■□□□□ 0.69
SSBP4-213ENST00000602088 MRPL12P52815 198 aaKnown RBP19.35■□□□□ 0.69
SSBP4-213ENST00000602088 PDE4DQ08499 809 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 APOBRQ0VD83 1088 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 RTN1Q16799 776 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 IQSEC1Q6DN90 963 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 NSUN6Q8TEA1 469 aaKnown RBP19.35■□□□□ 0.69
SSBP4-213ENST00000602088 RMDN3Q96TC7 470 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 SEC63Q9UGP8 760 aaKnown RBP19.35■□□□□ 0.69
SSBP4-213ENST00000602088 ALPK3Q96L96 1907 aa19.35■□□□□ 0.69
SSBP4-213ENST00000602088 GOLGA8AA7E2F4 631 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 GOLGA8BA8MQT2 603 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 EVI5O60447 810 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 GJA9P57773 515 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 FUT2Q10981 343 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 PPP2R5BQ15173 497 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 KLHDC9Q8NEP7 349 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 UPF3AQ9H1J1 476 aaKnown RBP19.34■□□□□ 0.69
SSBP4-213ENST00000602088 FAM217BQ9NTX9 383 aaPredicted RBP19.34■□□□□ 0.69
SSBP4-213ENST00000602088 GNEQ9Y223 722 aaKnown RBP19.34■□□□□ 0.69
SSBP4-213ENST00000602088 CYP46A1Q9Y6A2 500 aa19.34■□□□□ 0.69
SSBP4-213ENST00000602088 hCG_1642624A0A1W2PR95 340 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 RBM47A0AV96 593 aaKnown RBP19.33■□□□□ 0.68
SSBP4-213ENST00000602088 GCOM1H8Y6P7 765 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-213ENST00000602088 EIF5BO60841 1220 aaKnown RBP19.33■□□□□ 0.68
SSBP4-213ENST00000602088 POLR2MP0CAP2 368 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 SMPD1P17405 629 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 CDC27P30260 824 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 HOXA13P31271 388 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-213ENST00000602088 LRRC26Q2I0M4 334 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 IWS1Q96ST2 819 aa19.33■□□□□ 0.68
SSBP4-213ENST00000602088 TSEN34Q9BSV6 310 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms