RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GSE1Q14687 1217 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 RESP18Q5W5W9 173 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 FASTKD5Q7L8L6 764 aaKnown RBP20.45■□□□□ 0.86
VRK3-225ENST00000601912 FAM13BQ9NYF5 915 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 NEMFO60524 1076 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
VRK3-225ENST00000601912 ALAS1P13196 640 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 HOXA7P31268 230 aaPredicted RBP20.45■□□□□ 0.86
VRK3-225ENST00000601912 HOXA13P31271 388 aaPredicted RBP20.45■□□□□ 0.86
VRK3-225ENST00000601912 USP11P51784 963 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 TREML2Q5T2D2 321 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 SHC4Q6S5L8 630 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 C4orf32Q8N8J7 132 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 NUP62CLQ9H1M0 184 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
VRK3-225ENST00000601912 PTPRFP10586 1907 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 PFKFB1P16118 471 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 GCFC2P16383 781 aaKnown RBP20.44■□□□□ 0.86
VRK3-225ENST00000601912 NDUFA8P51970 172 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 SNAPC2Q13487 334 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 PPP4R3AQ6IN85 833 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 SAMD3Q8N6K7 520 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 ENGASEQ8NFI3 743 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 EHMT1Q9H9B1 1298 aa20.44■□□□□ 0.86
VRK3-225ENST00000601912 VWA3AA6NCI4 1184 aa20.43■□□□□ 0.86
VRK3-225ENST00000601912 SPDYE16A6NNV3 312 aaPredicted RBP20.43■□□□□ 0.86
VRK3-225ENST00000601912 PRPHP41219 470 aa20.43■□□□□ 0.86
VRK3-225ENST00000601912 PABPC4Q13310 644 aaKnown RBP eCLIP20.43■□□□□ 0.86
VRK3-225ENST00000601912 SNW1Q13573 536 aaKnown RBP20.43■□□□□ 0.86
VRK3-225ENST00000601912 DTHD1Q6ZMT9 781 aa20.43■□□□□ 0.86
VRK3-225ENST00000601912 FMR1NBQ8N0W7 255 aaPredicted RBP20.43■□□□□ 0.86
VRK3-225ENST00000601912 CSRNP2Q9H175 543 aa20.43■□□□□ 0.86
VRK3-225ENST00000601912 MAP3K20Q9NYL2 800 aaKnown RBP20.43■□□□□ 0.86
VRK3-225ENST00000601912 AGTPBP1Q9UPW5 1226 aa20.43■□□□□ 0.86
VRK3-225ENST00000601912 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
VRK3-225ENST00000601912 FAM237AA0A1B0GTK4 181 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 ATP2A1O14983 1001 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 ZNF445P59923 1031 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 IRX3P78415 501 aaPredicted RBP20.42■□□□□ 0.86
VRK3-225ENST00000601912 FCHSD1Q86WN1 690 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 REPS2Q8NFH8 660 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 WNK4Q96J92 1243 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 TNMDQ9H2S6 317 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 CLSTN2Q9H4D0 955 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 SMCHD1A6NHR9 2005 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 SYCE3A1L190 88 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 ITGBL1O95965 494 aaPredicted RBP20.42■□□□□ 0.86
VRK3-225ENST00000601912 OR52Z1P0C646 297 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 SREBF1P36956 1147 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 SYKP43405 635 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 ARHGAP4P98171 946 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 GRIN1Q05586 938 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 MB21D1Q8N884 522 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 CLEC4DQ8WXI8 215 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 TBC1D5Q92609 795 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 TRERF1Q96PN7 1200 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 TEX13BQ9BXU2 312 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 TMEM60Q9H2L4 133 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 HOMER2Q9NSB8 354 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 HPSEQ9Y251 543 aa20.42■□□□□ 0.86
VRK3-225ENST00000601912 LOC285556D6RIA3 1793 aa20.41■□□□□ 0.86
VRK3-225ENST00000601912 RLFQ13129 1914 aa20.41■□□□□ 0.86
VRK3-225ENST00000601912 LONP1P36776 959 aaKnown RBP20.41■□□□□ 0.86
VRK3-225ENST00000601912 HSD17B4P51659 736 aa20.41■□□□□ 0.86
VRK3-225ENST00000601912 TKFCQ3LXA3 575 aa20.41■□□□□ 0.86
VRK3-225ENST00000601912 SPECC1Q5M775 1068 aa20.41■□□□□ 0.86
VRK3-225ENST00000601912 SNRNP48Q6IEG0 339 aaKnown RBP20.41■□□□□ 0.86
VRK3-225ENST00000601912 MOXD1Q6UVY6 613 aa20.41■□□□□ 0.86
VRK3-225ENST00000601912 DDX25Q9UHL0 483 aaKnown RBP20.41■□□□□ 0.86
VRK3-225ENST00000601912 KCNH3Q9ULD8 1083 aa20.41■□□□□ 0.86
VRK3-225ENST00000601912 NFIBO00712 420 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 CTAGE5O15320 804 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 ZNF202O95125 648 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 TDP2O95551 362 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 OSBPP22059 807 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 GJA5P36382 358 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 TMEM132BQ14DG7 1078 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 CAMK4Q16566 473 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 CALCRLQ16602 461 aa20.4■□□□□ 0.86
VRK3-225ENST00000601912 P2RX7Q99572 595 aaKnown RBP20.4■□□□□ 0.86
VRK3-225ENST00000601912 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
VRK3-225ENST00000601912 EDIL3O43854 480 aa20.39■□□□□ 0.86
VRK3-225ENST00000601912 STAT3P40763 770 aa20.39■□□□□ 0.86
VRK3-225ENST00000601912 GHRHRQ02643 423 aa20.39■□□□□ 0.86
VRK3-225ENST00000601912 POTEDQ86YR6 584 aa20.39■□□□□ 0.86
VRK3-225ENST00000601912 CRYGNQ8WXF5 182 aa20.39■□□□□ 0.86
VRK3-225ENST00000601912 RNF146Q9NTX7 359 aa20.39■□□□□ 0.86
VRK3-225ENST00000601912 CYP3A7-CYP3A51PA0A087WV96 503 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 CETPP11597 493 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 CYP3A7P24462 503 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 GTF2A2P52657 109 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 PLS1Q14651 629 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 MUM1L1Q5H9M0 696 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 CST9Q5W186 159 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 TIGD1Q96MW7 591 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 SDF4Q9BRK5 362 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 ASCC2Q9H1I8 757 aaPredicted RBP20.38■□□□□ 0.85
VRK3-225ENST00000601912 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
VRK3-225ENST00000601912 RABGAP1Q9Y3P9 1069 aa20.38■□□□□ 0.85
VRK3-225ENST00000601912 MYH7BA7E2Y1 1941 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms