RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 SMPD1P17405 629 aa30.38■■■□□ 2.45
PNKP-216ENST00000601816 SART3Q15020 963 aaKnown RBP30.38■■■□□ 2.45
PNKP-216ENST00000601816 QRICH1Q2TAL8 776 aa30.38■■■□□ 2.45
PNKP-216ENST00000601816 STOX1Q6ZVD7 989 aa30.38■■■□□ 2.45
PNKP-216ENST00000601816 RGS22Q8NE09 1264 aa30.38■■■□□ 2.45
PNKP-216ENST00000601816 LRCH3Q96II8 777 aa30.38■■■□□ 2.45
PNKP-216ENST00000601816 JMJD4Q9H9V9 463 aa30.38■■■□□ 2.45
PNKP-216ENST00000601816 BEX3Q00994 111 aa30.37■■■□□ 2.45
PNKP-216ENST00000601816 LRIT3Q3SXY7 679 aa30.37■■■□□ 2.45
PNKP-216ENST00000601816 ANKRD33Q7Z3H0 272 aa30.37■■■□□ 2.45
PNKP-216ENST00000601816 FBXO11Q86XK2 927 aa30.37■■■□□ 2.45
PNKP-216ENST00000601816 STAG2Q8N3U4 1231 aa30.37■■■□□ 2.45
PNKP-216ENST00000601816 DNERQ8NFT8 737 aa30.37■■■□□ 2.45
PNKP-216ENST00000601816 VTI1AQ96AJ9 217 aa30.37■■■□□ 2.45
PNKP-216ENST00000601816 TRIM43BA6NCK2 446 aa30.36■■■□□ 2.45
PNKP-216ENST00000601816 KLRF2D3W0D1 207 aa30.36■■■□□ 2.45
PNKP-216ENST00000601816 DYNC1LI2O43237 492 aaPredicted RBP30.36■■■□□ 2.45
PNKP-216ENST00000601816 PDE4DQ08499 809 aa30.36■■■□□ 2.45
PNKP-216ENST00000601816 TRIM43Q96BQ3 446 aaPredicted RBP30.36■■■□□ 2.45
PNKP-216ENST00000601816 ESYT1Q9BSJ8 1104 aa30.36■■■□□ 2.45
PNKP-216ENST00000601816 MAF1Q9H063 256 aa30.36■■■□□ 2.45
PNKP-216ENST00000601816 Q9Y3F1 56 aa30.36■■■□□ 2.45
PNKP-216ENST00000601816 DCDC2CA8MYV0 355 aa30.35■■■□□ 2.45
PNKP-216ENST00000601816 WTAPQ15007 396 aa30.35■■■□□ 2.45
PNKP-216ENST00000601816 FSCN1Q16658 493 aaKnown RBP30.35■■■□□ 2.45
PNKP-216ENST00000601816 BADQ92934 168 aa30.35■■■□□ 2.45
PNKP-216ENST00000601816 TOX2Q96NM4 488 aa30.35■■■□□ 2.45
PNKP-216ENST00000601816 MAD2L2Q9UI95 211 aa30.35■■■□□ 2.45
PNKP-216ENST00000601816 MRPL11Q9Y3B7 192 aaKnown RBP30.35■■■□□ 2.45
PNKP-216ENST00000601816 MROH7Q68CQ1 1323 aa30.34■■■□□ 2.45
PNKP-216ENST00000601816 B4DLN1 442 aa30.34■■■□□ 2.45
PNKP-216ENST00000601816 PTGS1P23219 599 aa30.34■■■□□ 2.45
PNKP-216ENST00000601816 MRPL12P52815 198 aaKnown RBP30.34■■■□□ 2.45
PNKP-216ENST00000601816 BMP2KLQ5H9B9 411 aa30.34■■■□□ 2.45
PNKP-216ENST00000601816 CHST3Q7LGC8 479 aa30.34■■■□□ 2.45
PNKP-216ENST00000601816 MCF2L2Q86YR7 1114 aa30.34■■■□□ 2.45
PNKP-216ENST00000601816 LSG1Q9H089 658 aaKnown RBP30.34■■■□□ 2.45
PNKP-216ENST00000601816 TMEM39AQ9NV64 488 aa30.34■■■□□ 2.45
PNKP-216ENST00000601816 A0A0U1RQG5 324 aaPredicted RBP30.33■■■□□ 2.45
PNKP-216ENST00000601816 PALM3A6NDB9 673 aaPredicted RBP30.33■■■□□ 2.45
PNKP-216ENST00000601816 KIAA0355O15063 1070 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 ZEB2O60315 1214 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 EDNRBP24530 442 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 GRM4Q14833 912 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 TMEM67Q5HYA8 995 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 TMEM63BQ5T3F8 832 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 SKAP1Q86WV1 359 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 MB21D2Q8IYB1 491 aaPredicted RBP30.33■■■□□ 2.45
PNKP-216ENST00000601816 WDR11Q9BZH6 1224 aa30.33■■■□□ 2.45
PNKP-216ENST00000601816 FAAP100Q0VG06 881 aa30.32■■■□□ 2.44
PNKP-216ENST00000601816 DUSP28Q4G0W2 176 aa30.32■■■□□ 2.44
PNKP-216ENST00000601816 CXCL17Q6UXB2 119 aa30.32■■■□□ 2.44
PNKP-216ENST00000601816 AMNQ9BXJ7 453 aa30.32■■■□□ 2.44
PNKP-216ENST00000601816 SENP2Q9HC62 589 aa30.32■■■□□ 2.44
PNKP-216ENST00000601816 LAMA3Q16787 3333 aa30.31■■■□□ 2.44
PNKP-216ENST00000601816 RBM47A0AV96 593 aaKnown RBP30.31■■■□□ 2.44
PNKP-216ENST00000601816 ARVCFO00192 962 aa30.31■■■□□ 2.44
PNKP-216ENST00000601816 CABYRO75952 493 aa30.31■■■□□ 2.44
PNKP-216ENST00000601816 RAG1P15918 1043 aa30.31■■■□□ 2.44
PNKP-216ENST00000601816 CDK7P50613 346 aa30.31■■■□□ 2.44
PNKP-216ENST00000601816 ANTXR2P58335 489 aa30.31■■■□□ 2.44
PNKP-216ENST00000601816 SYTL5Q8TDW5 730 aaPredicted RBP30.31■■■□□ 2.44
PNKP-216ENST00000601816 TBC1D5Q92609 795 aa30.31■■■□□ 2.44
PNKP-216ENST00000601816 CATIPQ7Z7H3 387 aa30.3■■■□□ 2.44
PNKP-216ENST00000601816 MTMR8Q96EF0 704 aa30.3■■■□□ 2.44
PNKP-216ENST00000601816 SZT2Q5T011 3432 aa30.29■■■□□ 2.44
PNKP-216ENST00000601816 ZBTB5O15062 677 aa30.29■■■□□ 2.44
PNKP-216ENST00000601816 ITGB8P26012 769 aa30.29■■■□□ 2.44
PNKP-216ENST00000601816 ANO2Q9NQ90 1003 aa30.29■■■□□ 2.44
PNKP-216ENST00000601816 MYH6P13533 1939 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 TROAPQ12815 778 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 PPP2R5BQ15173 497 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 GPR153Q6NV75 609 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 IGDCC4Q8TDY8 1250 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 NSUN6Q8TEA1 469 aaKnown RBP30.28■■■□□ 2.44
PNKP-216ENST00000601816 SCFD2Q8WU76 684 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 TAAR1Q96RJ0 339 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 COL20A1Q9P218 1284 aa30.28■■■□□ 2.44
PNKP-216ENST00000601816 SLC27A2O14975 620 aa30.27■■■□□ 2.44
PNKP-216ENST00000601816 TLR3O15455 904 aaKnown RBP30.27■■■□□ 2.44
PNKP-216ENST00000601816 CASC1Q6TDU7 716 aa30.27■■■□□ 2.44
PNKP-216ENST00000601816 HOMER1Q86YM7 354 aa30.27■■■□□ 2.44
PNKP-216ENST00000601816 OR6J1Q8NGC5 347 aa30.27■■■□□ 2.44
PNKP-216ENST00000601816 TBX21Q9UL17 535 aa30.27■■■□□ 2.44
PNKP-216ENST00000601816 NKRFO15226 690 aaKnown RBP eCLIP30.26■■■□□ 2.43
PNKP-216ENST00000601816 PPP1R11O60927 126 aaPredicted RBP30.26■■■□□ 2.43
PNKP-216ENST00000601816 CFBP00751 764 aa30.26■■■□□ 2.43
PNKP-216ENST00000601816 TRAF1Q13077 416 aa30.26■■■□□ 2.43
PNKP-216ENST00000601816 CREB3L3Q68CJ9 461 aa30.26■■■□□ 2.43
PNKP-216ENST00000601816 FAM126BQ8IXS8 530 aa30.26■■■□□ 2.43
PNKP-216ENST00000601816 RMDN3Q96TC7 470 aa30.26■■■□□ 2.43
PNKP-216ENST00000601816 RIOX1Q9H6W3 641 aa30.26■■■□□ 2.43
PNKP-216ENST00000601816 PRC1O43663 620 aa30.25■■■□□ 2.43
PNKP-216ENST00000601816 CPT1AP50416 773 aa30.25■■■□□ 2.43
PNKP-216ENST00000601816 SHHQ15465 462 aa30.25■■■□□ 2.43
PNKP-216ENST00000601816 SLC35G1Q2M3R5 365 aa30.25■■■□□ 2.43
PNKP-216ENST00000601816 PIGSQ96S52 555 aa30.25■■■□□ 2.43
PNKP-216ENST00000601816 IWS1Q96ST2 819 aa30.25■■■□□ 2.43
PNKP-216ENST00000601816 MTA3Q9BTC8 594 aa30.25■■■□□ 2.43
PNKP-216ENST00000601816 LY9Q9HBG7 655 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms