RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 SPZ1Q9BXG8 430 aa20.35■□□□□ 0.85
IRF3-230ENST00000601809 AMNQ9BXJ7 453 aa20.35■□□□□ 0.85
IRF3-230ENST00000601809 PRO3102Q9H379 93 aa20.35■□□□□ 0.85
IRF3-230ENST00000601809 PHF24Q9UPV7 400 aa20.35■□□□□ 0.85
IRF3-230ENST00000601809 GNEQ9Y223 722 aaKnown RBP20.35■□□□□ 0.85
IRF3-230ENST00000601809 RBM47A0AV96 593 aaKnown RBP20.34■□□□□ 0.85
IRF3-230ENST00000601809 MYADML2A6NDP7 307 aa20.34■□□□□ 0.85
IRF3-230ENST00000601809 EVI5O60447 810 aa20.34■□□□□ 0.85
IRF3-230ENST00000601809 CALML3P27482 149 aa20.34■□□□□ 0.85
IRF3-230ENST00000601809 CST5P28325 142 aaPredicted RBP20.34■□□□□ 0.85
IRF3-230ENST00000601809 SMARCA1P28370 1054 aa20.34■□□□□ 0.85
IRF3-230ENST00000601809 TMEM63BQ5T3F8 832 aa20.34■□□□□ 0.85
IRF3-230ENST00000601809 DHX32Q7L7V1 743 aaKnown RBP20.34■□□□□ 0.85
IRF3-230ENST00000601809 SYTL5Q8TDW5 730 aaPredicted RBP20.34■□□□□ 0.85
IRF3-230ENST00000601809 SENP6Q9GZR1 1112 aaPredicted RBP20.34■□□□□ 0.85
IRF3-230ENST00000601809 PDGFCQ9NRA1 345 aa20.34■□□□□ 0.85
IRF3-230ENST00000601809 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
IRF3-230ENST00000601809 MRPL11Q9Y3B7 192 aaKnown RBP20.34■□□□□ 0.85
IRF3-230ENST00000601809 SNX14Q9Y5W7 946 aa20.34■□□□□ 0.85
IRF3-230ENST00000601809 ADCYAP1R1P41586 468 aa20.33■□□□□ 0.85
IRF3-230ENST00000601809 HSD17B4P51659 736 aa20.33■□□□□ 0.85
IRF3-230ENST00000601809 GJA9P57773 515 aa20.33■□□□□ 0.85
IRF3-230ENST00000601809 KRT32Q14532 448 aa20.33■□□□□ 0.85
IRF3-230ENST00000601809 FBXO16Q8IX29 292 aaPredicted RBP20.33■□□□□ 0.85
IRF3-230ENST00000601809 TCEANC2Q96MN5 208 aa20.33■□□□□ 0.85
IRF3-230ENST00000601809 VTA1Q9NP79 307 aa20.33■□□□□ 0.85
IRF3-230ENST00000601809 NR2E3Q9Y5X4 410 aa20.33■□□□□ 0.85
IRF3-230ENST00000601809 PNMA6FA0A0J9YX94 578 aa20.32■□□□□ 0.84
IRF3-230ENST00000601809 KBTBD13C9JR72 458 aa20.32■□□□□ 0.84
IRF3-230ENST00000601809 DHX16O60231 1041 aaKnown RBP20.32■□□□□ 0.84
IRF3-230ENST00000601809 PLEKHA8P1O95397 391 aa20.32■□□□□ 0.84
IRF3-230ENST00000601809 PTGS1P23219 599 aa20.32■□□□□ 0.84
IRF3-230ENST00000601809 C1orf53Q5VUE5 145 aa20.32■□□□□ 0.84
IRF3-230ENST00000601809 SRBD1Q8N5C6 995 aaKnown RBP20.32■□□□□ 0.84
IRF3-230ENST00000601809 NUP133Q8WUM0 1156 aa20.32■□□□□ 0.84
IRF3-230ENST00000601809 TSEN34Q9BSV6 310 aaKnown RBP20.32■□□□□ 0.84
IRF3-230ENST00000601809 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
IRF3-230ENST00000601809 CCDC69A6NI79 296 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 REC8O95072 547 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 SMPD1P17405 629 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 RXRAP19793 462 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 APOA5Q6Q788 366 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 SLC39A5Q6ZMH5 540 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 RNF180Q86T96 592 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 C7orf61Q8IZ16 206 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 TAAR1Q96RJ0 339 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 PCDHA1Q9Y5I3 950 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 KIAA1217Q5T5P2 1943 aa20.31■□□□□ 0.84
IRF3-230ENST00000601809 KIF5BP33176 963 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 TNFAIP2Q03169 654 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 IQSEC1Q6DN90 963 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 EEPD1Q7L9B9 569 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 HOMER1Q86YM7 354 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 MCF2L2Q86YR7 1114 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 FBXL16Q8N461 479 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 CTCFLQ8NI51 663 aaPredicted RBP20.3■□□□□ 0.84
IRF3-230ENST00000601809 USP26Q9BXU7 913 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 AGXT2Q9BYV1 514 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 LTBP2Q14767 1821 aa20.3■□□□□ 0.84
IRF3-230ENST00000601809 A0A1W2PQ45 241 aaPredicted RBP20.29■□□□□ 0.84
IRF3-230ENST00000601809 A0A1W2PQY0 241 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 CALM1P0DP23 149 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 CALM2P0DP24 149 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 CALM3P0DP25 149 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 CPA1P15085 419 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 FUT2Q10981 343 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 NFXL1Q6ZNB6 911 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 RAB11FIP4Q86YS3 637 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 SAMD3Q8N6K7 520 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 FANCBQ8NB91 859 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 LZTS2Q9BRK4 669 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 FAM217BQ9NTX9 383 aaPredicted RBP20.29■□□□□ 0.84
IRF3-230ENST00000601809 MAP3K20Q9NYL2 800 aaKnown RBP20.29■□□□□ 0.84
IRF3-230ENST00000601809 Q9Y3F1 56 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 SLC12A7Q9Y666 1083 aa20.29■□□□□ 0.84
IRF3-230ENST00000601809 HMGB1P09429 215 aaKnown RBP20.28■□□□□ 0.84
IRF3-230ENST00000601809 GNAQP50148 359 aa20.28■□□□□ 0.84
IRF3-230ENST00000601809 ACLYP53396 1101 aa20.28■□□□□ 0.84
IRF3-230ENST00000601809 ATN1P54259 1190 aaPredicted RBP20.28■□□□□ 0.84
IRF3-230ENST00000601809 RTP1P59025 263 aa20.28■□□□□ 0.84
IRF3-230ENST00000601809 KCNA10Q16322 511 aa20.28■□□□□ 0.84
IRF3-230ENST00000601809 DUSP28Q4G0W2 176 aa20.28■□□□□ 0.84
IRF3-230ENST00000601809 CMTR1Q8N1G2 835 aaKnown RBP20.28■□□□□ 0.84
IRF3-230ENST00000601809 FERMT2Q96AC1 680 aa20.28■□□□□ 0.84
IRF3-230ENST00000601809 COLQQ9Y215 455 aaPredicted RBP20.28■□□□□ 0.84
IRF3-230ENST00000601809 NID2Q14112 1375 aa20.27■□□□□ 0.84
IRF3-230ENST00000601809 MOXD2PA6NHM9 499 aa20.27■□□□□ 0.84
IRF3-230ENST00000601809 CFBP00751 764 aa20.27■□□□□ 0.84
IRF3-230ENST00000601809 TLK2Q86UE8 772 aa20.27■□□□□ 0.84
IRF3-230ENST00000601809 NSUN6Q8TEA1 469 aaKnown RBP20.27■□□□□ 0.84
IRF3-230ENST00000601809 JAKMIP1Q96N16 626 aaKnown RBP20.27■□□□□ 0.84
IRF3-230ENST00000601809 GDF15Q99988 308 aa20.27■□□□□ 0.84
IRF3-230ENST00000601809 PXMP2Q9NR77 195 aa20.27■□□□□ 0.84
IRF3-230ENST00000601809 PCDH10Q9P2E7 1040 aa20.27■□□□□ 0.84
IRF3-230ENST00000601809 ZMYND8Q9ULU4 1186 aaPredicted RBP20.27■□□□□ 0.84
IRF3-230ENST00000601809 FRMPD4Q14CM0 1322 aa20.27■□□□□ 0.83
IRF3-230ENST00000601809 CNTNAP5Q8WYK1 1306 aa20.27■□□□□ 0.83
IRF3-230ENST00000601809 MYCNP04198 464 aaPredicted RBP20.26■□□□□ 0.83
IRF3-230ENST00000601809 C6orf222P0C671 652 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms