RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 FDX1P10109 184 aa19.09■□□□□ 0.65
SSBP4-211ENST00000601614 ZSCAN25Q6NSZ9 544 aa19.09■□□□□ 0.65
SSBP4-211ENST00000601614 HERC6Q8IVU3 1022 aa19.09■□□□□ 0.65
SSBP4-211ENST00000601614 TKFCQ3LXA3 575 aa19.08■□□□□ 0.64
SSBP4-211ENST00000601614 DUSP28Q4G0W2 176 aa19.08■□□□□ 0.64
SSBP4-211ENST00000601614 NEDD1Q8NHV4 660 aa19.08■□□□□ 0.64
SSBP4-211ENST00000601614 PHOSPHO2Q8TCD6 241 aa19.08■□□□□ 0.64
SSBP4-211ENST00000601614 STAG1Q8WVM7 1258 aa19.08■□□□□ 0.64
SSBP4-211ENST00000601614 VTA1Q9NP79 307 aa19.08■□□□□ 0.64
SSBP4-211ENST00000601614 ISY1Q9ULR0 285 aaKnown RBP19.08■□□□□ 0.64
SSBP4-211ENST00000601614 SIP14410 1827 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 LCHNA4D1U4 455 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 MYL3P08590 195 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 IQCF3P0C7M6 154 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 SUPT20HL2P0C7V6 817 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 ACTN1P12814 892 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 KCTD1Q719H9 257 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 TMCO2Q7Z6W1 182 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-211ENST00000601614 FAM160B2Q86V87 743 aa19.07■□□□□ 0.64
SSBP4-211ENST00000601614 PI4K2BG5E9Z4 385 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 M0R2C6 588 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 GPAA1O43292 621 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
SSBP4-211ENST00000601614 HMMRO75330 724 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 MCCP23508 829 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 NBPF20Q3BBV1 942 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 NSMFQ6X4W1 530 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 ALYREFQ86V81 257 aaKnown RBP19.06■□□□□ 0.64
SSBP4-211ENST00000601614 CHURC1Q8WUH1 139 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 APPBP2Q92624 585 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 GMCL1Q96IK5 515 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 POLR3EQ9NVU0 708 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 PRR12Q9ULL5 1215 aa19.06■□□□□ 0.64
SSBP4-211ENST00000601614 TSPY3P0CV98 308 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 TSPY8P0CW00 308 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 RFC2P35250 354 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 SLC1A4P43007 532 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 TDO2P48775 406 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 IKQ13123 557 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-211ENST00000601614 FAM47CQ5HY64 1035 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 GDPD5Q8WTR4 605 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 WDR11Q9BZH6 1224 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 ZBTB40Q9NUA8 1239 aa19.05■□□□□ 0.64
SSBP4-211ENST00000601614 PLA2G6O60733 806 aa19.04■□□□□ 0.64
SSBP4-211ENST00000601614 ALDH5A1P51649 535 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-211ENST00000601614 TFAP4Q01664 338 aa19.04■□□□□ 0.64
SSBP4-211ENST00000601614 GPNMBQ14956 572 aa19.04■□□□□ 0.64
SSBP4-211ENST00000601614 KBTBD3Q8NAB2 608 aa19.04■□□□□ 0.64
SSBP4-211ENST00000601614 MTG1Q9BT17 334 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-211ENST00000601614 FTOQ9C0B1 505 aaKnown RBP eCLIP19.04■□□□□ 0.64
SSBP4-211ENST00000601614 RBM47A0AV96 593 aaKnown RBP19.03■□□□□ 0.64
SSBP4-211ENST00000601614 KIF28PB7ZC32 967 aa19.03■□□□□ 0.64
SSBP4-211ENST00000601614 PITPNM1O00562 1244 aa19.03■□□□□ 0.64
SSBP4-211ENST00000601614 BAATQ14032 418 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-211ENST00000601614 IFNL3Q8IZI9 196 aa19.03■□□□□ 0.64
SSBP4-211ENST00000601614 OR6J1Q8NGC5 347 aa19.03■□□□□ 0.64
SSBP4-211ENST00000601614 ZNF287Q9HBT7 754 aa19.03■□□□□ 0.64
SSBP4-211ENST00000601614 CCPG1Q9ULG6 757 aa19.03■□□□□ 0.64
SSBP4-211ENST00000601614 NFIBO00712 420 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 RNF113AO15541 343 aaKnown RBP19.02■□□□□ 0.64
SSBP4-211ENST00000601614 CPT1AP50416 773 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 DEFB103AP81534 67 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 TSHZ3Q63HK5 1081 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 RCSD1Q6JBY9 416 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 COPS5Q92905 334 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 CTAGE1Q96RT6 745 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 IL17RBQ9NRM6 502 aa19.02■□□□□ 0.64
SSBP4-211ENST00000601614 NMT2O60551 498 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 APPP05067 770 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 WDR5P61964 334 aaKnown RBP19.01■□□□□ 0.63
SSBP4-211ENST00000601614 TCTN1Q2MV58 587 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 NFRKBQ6P4R8 1299 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 RETREG2Q8NC44 543 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 SEC62Q99442 399 aaKnown RBP19.01■□□□□ 0.63
SSBP4-211ENST00000601614 SUGCTQ9HAC7 445 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 INCENPQ9NQS7 918 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 MTUS1Q9ULD2 1270 aa19.01■□□□□ 0.63
SSBP4-211ENST00000601614 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19■□□□□ 0.63
SSBP4-211ENST00000601614 PATL2C9JE40 543 aaKnown RBP19■□□□□ 0.63
SSBP4-211ENST00000601614 BAIAP3O94812 1187 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 ICAM1P05362 532 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 TTBK2Q6IQ55 1244 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 SLC30A10Q6XR72 485 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 FAM178BQ8IXR5 827 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 GADD45GIP1Q8TAE8 222 aaPredicted RBP19■□□□□ 0.63
SSBP4-211ENST00000601614 LRRCC1Q9C099 1032 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 RANBP17Q9H2T7 1088 aaKnown RBP19■□□□□ 0.63
SSBP4-211ENST00000601614 UBE2ZQ9H832 354 aaPredicted RBP19■□□□□ 0.63
SSBP4-211ENST00000601614 GPHNQ9NQX3 736 aaPredicted RBP19■□□□□ 0.63
SSBP4-211ENST00000601614 ECHDC1Q9NTX5 307 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 MTMR7Q9Y216 660 aa19■□□□□ 0.63
SSBP4-211ENST00000601614 A6NJR5 290 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 PRR33A8MZF0 331 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 IL9P15248 144 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 GNAT2P19087 354 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 SLC16A2P36021 539 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 PDE4BQ07343 736 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 PPARAQ07869 468 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 BFSP2Q13515 415 aa18.99■□□□□ 0.63
SSBP4-211ENST00000601614 LMCD1Q9NZU5 365 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms