RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 C1orf53Q5VUE5 145 aa19.98■□□□□ 0.79
HERC3-214ENST00000601319 SGMS1Q86VZ5 419 aa19.98■□□□□ 0.79
HERC3-214ENST00000601319 MCF2L2Q86YR7 1114 aa19.98■□□□□ 0.79
HERC3-214ENST00000601319 KLHDC9Q8NEP7 349 aa19.98■□□□□ 0.79
HERC3-214ENST00000601319 GPHNQ9NQX3 736 aaPredicted RBP19.98■□□□□ 0.79
HERC3-214ENST00000601319 TRIOBPQ9H2D6 2365 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 CYTH3O43739 400 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 PPP1R11O60927 126 aaPredicted RBP19.97■□□□□ 0.79
HERC3-214ENST00000601319 SMARCA1P28370 1054 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 ADCYAP1R1P41586 468 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 CCSAPQ6IQ19 270 aaPredicted RBP19.97■□□□□ 0.79
HERC3-214ENST00000601319 TAPT1Q6NXT6 567 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 CTCFLQ8NI51 663 aaPredicted RBP19.97■□□□□ 0.79
HERC3-214ENST00000601319 KCNB2Q92953 911 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 NEK1Q96PY6 1258 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 SPZ1Q9BXG8 430 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 PRO3102Q9H379 93 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 VAT1LQ9HCJ6 419 aa19.97■□□□□ 0.79
HERC3-214ENST00000601319 MOXD2PA6NHM9 499 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 CCDC69A6NI79 296 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 EPB41L2O43491 1005 aaKnown RBP19.96■□□□□ 0.79
HERC3-214ENST00000601319 REC8O95072 547 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 MYCNP04198 464 aaPredicted RBP19.96■□□□□ 0.79
HERC3-214ENST00000601319 CALM1P0DP23 149 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 CALM2P0DP24 149 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 CALM3P0DP25 149 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 TNFAIP2Q03169 654 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 FBXO16Q8IX29 292 aaPredicted RBP19.96■□□□□ 0.79
HERC3-214ENST00000601319 RASEFQ8IZ41 740 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 SAMD3Q8N6K7 520 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 LZTS2Q9BRK4 669 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 SPC25Q9HBM1 224 aa19.96■□□□□ 0.79
HERC3-214ENST00000601319 MAP3K20Q9NYL2 800 aaKnown RBP19.96■□□□□ 0.79
HERC3-214ENST00000601319 COLQQ9Y215 455 aaPredicted RBP19.96■□□□□ 0.79
HERC3-214ENST00000601319 GNEQ9Y223 722 aaKnown RBP19.96■□□□□ 0.79
HERC3-214ENST00000601319 A0A1W2PQ45 241 aaPredicted RBP19.95■□□□□ 0.78
HERC3-214ENST00000601319 A0A1W2PQY0 241 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 B4DLN1 442 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 OPLAHO14841 1288 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 HSD17B4P51659 736 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 MRPL12P52815 198 aaKnown RBP19.95■□□□□ 0.78
HERC3-214ENST00000601319 ACLYP53396 1101 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 IQSEC1Q6DN90 963 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 SLC39A5Q6ZMH5 540 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 NFXL1Q6ZNB6 911 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 PCSK9Q8NBP7 692 aaKnown RBP19.95■□□□□ 0.78
HERC3-214ENST00000601319 SYTL5Q8TDW5 730 aaPredicted RBP19.95■□□□□ 0.78
HERC3-214ENST00000601319 NUP133Q8WUM0 1156 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 PIGSQ96S52 555 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 Q9Y3F1 56 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 PCDHA1Q9Y5I3 950 aa19.95■□□□□ 0.78
HERC3-214ENST00000601319 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
HERC3-214ENST00000601319 PNMA6FA0A0J9YX94 578 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.94■□□□□ 0.78
HERC3-214ENST00000601319 RBM47A0AV96 593 aaKnown RBP19.94■□□□□ 0.78
HERC3-214ENST00000601319 CTAGE5O15320 804 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 HMGB1P09429 215 aaKnown RBP19.94■□□□□ 0.78
HERC3-214ENST00000601319 C6orf222P0C671 652 aaPredicted RBP19.94■□□□□ 0.78
HERC3-214ENST00000601319 HSPA4P34932 840 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 GNAQP50148 359 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 ATN1P54259 1190 aaPredicted RBP19.94■□□□□ 0.78
HERC3-214ENST00000601319 RTP1P59025 263 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 EXOSC10Q01780 885 aaKnown RBP19.94■□□□□ 0.78
HERC3-214ENST00000601319 PDE4DQ08499 809 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 CHRDL2Q6WN34 429 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 DHX32Q7L7V1 743 aaKnown RBP19.94■□□□□ 0.78
HERC3-214ENST00000601319 TLK2Q86UE8 772 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 HOMER1Q86YM7 354 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 MYL10Q9BUA6 226 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 COL20A1Q9P218 1284 aa19.94■□□□□ 0.78
HERC3-214ENST00000601319 MYADML2A6NDP7 307 aa19.93■□□□□ 0.78
HERC3-214ENST00000601319 SMPD1P17405 629 aa19.93■□□□□ 0.78
HERC3-214ENST00000601319 ADCK5Q3MIX3 580 aa19.93■□□□□ 0.78
HERC3-214ENST00000601319 HABP4Q5JVS0 413 aaKnown RBP19.93■□□□□ 0.78
HERC3-214ENST00000601319 NSUN6Q8TEA1 469 aaKnown RBP19.93■□□□□ 0.78
HERC3-214ENST00000601319 FERMT2Q96AC1 680 aa19.93■□□□□ 0.78
HERC3-214ENST00000601319 PDGFCQ9NRA1 345 aa19.93■□□□□ 0.78
HERC3-214ENST00000601319 ZMYND8Q9ULU4 1186 aaPredicted RBP19.93■□□□□ 0.78
HERC3-214ENST00000601319 SLC12A7Q9Y666 1083 aa19.93■□□□□ 0.78
HERC3-214ENST00000601319 A0A1W2PPC1 479 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 KCNA10Q16322 511 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 DUSP28Q4G0W2 176 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 EEPD1Q7L9B9 569 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 TBC1D5Q92609 795 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 IWS1Q96ST2 819 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 GDF15Q99988 308 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 ELP1O95163 1332 aa19.92■□□□□ 0.78
HERC3-214ENST00000601319 BMP8BP34820 402 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 TRIM60Q495X7 471 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 GNASQ5JWF2 1037 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 APOA5Q6Q788 366 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 SCFD2Q8WU76 684 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 RRP36Q96EU6 259 aaKnown RBP19.91■□□□□ 0.78
HERC3-214ENST00000601319 RMDN3Q96TC7 470 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 LRRC2Q9BYS8 371 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 ATP11BQ9Y2G3 1177 aa19.91■□□□□ 0.78
HERC3-214ENST00000601319 NKRFO15226 690 aaKnown RBP eCLIP19.9■□□□□ 0.78
HERC3-214ENST00000601319 PLEKHA8P1O95397 391 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 CFBP00751 764 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 ASGR1P07306 291 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms