RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TMEM265A0A087WTH1 108 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 PTGS1P23219 599 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 ITGA7Q13683 1181 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 DUSP28Q4G0W2 176 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 TMEM63BQ5T3F8 832 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 RNF207Q6ZRF8 634 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 IQCA1Q86XH1 822 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 TMEM199Q8N511 208 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.94■□□□□ 0.784e-7■□□□□ 9
SCAF1-204ENST00000601038 ZKSCAN3Q9BRR0 538 aa19.94■□□□□ 0.78
SCAF1-204ENST00000601038 KDM4AO75164 1064 aa19.93■□□□□ 0.78
SCAF1-204ENST00000601038 CALML3P27482 149 aa19.93■□□□□ 0.78
SCAF1-204ENST00000601038 C16orf59Q7L2K0 433 aa19.93■□□□□ 0.78
SCAF1-204ENST00000601038 ANKS1AQ92625 1134 aa19.93■□□□□ 0.78
SCAF1-204ENST00000601038 DSCC1Q9BVC3 393 aa19.93■□□□□ 0.78
SCAF1-204ENST00000601038 PPP1R12CQ9BZL4 782 aa19.93■□□□□ 0.78
SCAF1-204ENST00000601038 GRIN2DO15399 1336 aa19.93■□□□□ 0.78
SCAF1-204ENST00000601038 RBM47A0AV96 593 aaKnown RBP19.92■□□□□ 0.78
SCAF1-204ENST00000601038 GOLGA8HP0CJ92 632 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 CSF2RAP15509 400 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 RPS6P62753 249 aaKnown RBP19.92■□□□□ 0.78
SCAF1-204ENST00000601038 TMEM240Q5SV17 173 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 SLC30A10Q6XR72 485 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 PNMA1Q8ND90 353 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 DNERQ8NFT8 737 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 MPHOSPH6Q99547 160 aaKnown RBP19.92■□□□□ 0.78
SCAF1-204ENST00000601038 WDR11Q9BZH6 1224 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 CTNNA3Q9UI47 895 aa19.92■□□□□ 0.78
SCAF1-204ENST00000601038 IMMTQ16891 758 aaKnown RBP19.91■□□□□ 0.78
SCAF1-204ENST00000601038 RGS22Q8NE09 1264 aa19.91■□□□□ 0.78
SCAF1-204ENST00000601038 ZSWIM5Q9P217 1185 aa19.91■□□□□ 0.78
SCAF1-204ENST00000601038 LAMA2P24043 3122 aaKnown RBP19.9■□□□□ 0.78
SCAF1-204ENST00000601038 B4DLN1 442 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 B4E1Z4 1266 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 EDNRBP24530 442 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 CYP2C18P33260 490 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 MRPL12P52815 198 aaKnown RBP19.9■□□□□ 0.78
SCAF1-204ENST00000601038 PDE4DQ08499 809 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 RASIP1Q5U651 963 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 ZSCAN10Q96SZ4 725 aaPredicted RBP19.9■□□□□ 0.78
SCAF1-204ENST00000601038 UBA5Q9GZZ9 404 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 MAF1Q9H063 256 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 HIPK3Q9H422 1215 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 KAT14Q9H8E8 782 aa19.9■□□□□ 0.78
SCAF1-204ENST00000601038 DNAJB2P25686 324 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 CPT1AP50416 773 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 PSMC6P62333 389 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 USH1GQ495M9 461 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 PSRC1Q6PGN9 363 aaPredicted RBP19.89■□□□□ 0.77
SCAF1-204ENST00000601038 ZNF365Q70YC5 407 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.89■□□□□ 0.77
SCAF1-204ENST00000601038 ENAHQ8N8S7 591 aaPredicted RBP19.89■□□□□ 0.77
SCAF1-204ENST00000601038 MYLIPQ8WY64 445 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 KRT23Q9C075 422 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 CPVLQ9H3G5 476 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 IL23AQ9NPF7 189 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 POLR3EQ9NVU0 708 aa19.89■□□□□ 0.77
SCAF1-204ENST00000601038 LAMA4Q16363 1823 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 NKRFO15226 690 aaKnown RBP eCLIP19.88■□□□□ 0.77
SCAF1-204ENST00000601038 B4GALT4O60513 344 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 ACRP10323 421 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 CDC37Q16543 378 aaPredicted RBP19.88■□□□□ 0.77
SCAF1-204ENST00000601038 ASPRV1Q53RT3 343 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 ADGRF4Q8IZF3 695 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 MAFAQ8NHW3 353 aaPredicted RBP19.88■□□□□ 0.77
SCAF1-204ENST00000601038 SCFD2Q8WU76 684 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 TRPV6Q9H1D0 765 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 CNNM2Q9H8M5 875 aa19.88■□□□□ 0.77
SCAF1-204ENST00000601038 PURAQ00577 322 aaKnown RBP19.87■□□□□ 0.77
SCAF1-204ENST00000601038 PPP2R5BQ15173 497 aa19.87■□□□□ 0.77
SCAF1-204ENST00000601038 BRDTQ58F21 947 aaPredicted RBP19.87■□□□□ 0.77
SCAF1-204ENST00000601038 OR6J1Q8NGC5 347 aa19.87■□□□□ 0.77
SCAF1-204ENST00000601038 HERVK_113Q902F9 699 aa19.87■□□□□ 0.77
SCAF1-204ENST00000601038 NOC4LQ9BVI4 516 aaKnown RBP19.87■□□□□ 0.77
SCAF1-204ENST00000601038 ALDH8A1Q9H2A2 487 aaPredicted RBP19.87■□□□□ 0.77
SCAF1-204ENST00000601038 TNKSO95271 1327 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 ABCB11O95342 1321 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 UMODL1Q5DID0 1318 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 RAD50Q92878 1312 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 PARP1P09874 1014 aaKnown RBP19.86■□□□□ 0.77
SCAF1-204ENST00000601038 FOSL2P15408 326 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 TIFAQ96CG3 184 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 UBAC1Q9BSL1 405 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 ZNF576Q9H609 170 aa19.86■□□□□ 0.77
SCAF1-204ENST00000601038 GPHNQ9NQX3 736 aaPredicted RBP19.86■□□□□ 0.77
SCAF1-204ENST00000601038 A6NJR5 290 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 KPNA6O60684 536 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 FGBP02675 491 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 MYL3P08590 195 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 SUPT20HL2P0C7V6 817 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 GRIN2CQ14957 1233 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 TBC1D5Q92609 795 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 MTG1Q9BT17 334 aaPredicted RBP19.85■□□□□ 0.77
SCAF1-204ENST00000601038 IL25Q9H293 177 aa19.85■□□□□ 0.77
SCAF1-204ENST00000601038 MTIF3Q9H2K0 278 aaKnown RBP19.85■□□□□ 0.77
SCAF1-204ENST00000601038 GRXCR1A8MXD5 290 aa19.84■□□□□ 0.77
SCAF1-204ENST00000601038 TXNP10599 105 aaKnown RBP19.84■□□□□ 0.77
SCAF1-204ENST00000601038 CCL23P55773 120 aa19.84■□□□□ 0.77
SCAF1-204ENST00000601038 TTLL4Q14679 1199 aa19.84■□□□□ 0.77
SCAF1-204ENST00000601038 QRICH1Q2TAL8 776 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms