RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 KRT23Q9C075 422 aa17.61■□□□□ 0.41
SHKBP1-226ENST00000600791 RAD50Q92878 1312 aa17.61■□□□□ 0.41
SHKBP1-226ENST00000600791 LOC102724159A0A0B4J2E5 919 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 DYNC1LI2O43237 492 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 RPS6P62753 249 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 FPGSQ05932 587 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 PWP2Q15269 919 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 CDC37Q16543 378 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 USH1GQ495M9 461 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 FAM109BQ6ICB4 259 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 KIAA1211Q6ZU35 1233 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 FAM126BQ8IXS8 530 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 AP5M1Q9H0R1 490 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 CNNM2Q9H8M5 875 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 Q9Y3F1 56 aa17.6■□□□□ 0.41
SHKBP1-226ENST00000600791 CABYRO75952 493 aa17.59■□□□□ 0.41
SHKBP1-226ENST00000600791 TIMP1P01033 207 aa17.59■□□□□ 0.41
SHKBP1-226ENST00000600791 ASPRV1Q53RT3 343 aa17.59■□□□□ 0.41
SHKBP1-226ENST00000600791 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
SHKBP1-226ENST00000600791 STXBP5LQ9Y2K9 1186 aa17.59■□□□□ 0.41
SHKBP1-226ENST00000600791 A0A0C4DFX4 3053 aa17.59■□□□□ 0.41
SHKBP1-226ENST00000600791 EDNRBP24530 442 aa17.58■□□□□ 0.4
SHKBP1-226ENST00000600791 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
SHKBP1-226ENST00000600791 ADGRF4Q8IZF3 695 aa17.58■□□□□ 0.4
SHKBP1-226ENST00000600791 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-226ENST00000600791 WDR11Q9BZH6 1224 aa17.58■□□□□ 0.4
SHKBP1-226ENST00000600791 MYH6P13533 1939 aa17.58■□□□□ 0.4
SHKBP1-226ENST00000600791 GRIN2DO15399 1336 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 RBM47A0AV96 593 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 TLR3O15455 904 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 ZEB2O60315 1214 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 PARP1P09874 1014 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 CHMLP26374 656 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 SMAD3P84022 425 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 ZNF697Q5TEC3 545 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 MFSD5Q6N075 450 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 SLC43A3Q8NBI5 491 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 DNERQ8NFT8 737 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 FAM161BQ96MY7 647 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 GUCD1Q96NT3 240 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 UNC80Q8N2C7 3258 aa17.57■□□□□ 0.4
SHKBP1-226ENST00000600791 EYSQ5T1H1 3165 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 ABCB11O95342 1321 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 CD4P01730 458 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 PTH1RQ03431 593 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 PDE4DQ08499 809 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 ITGA7Q13683 1181 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 SEC23AQ15436 765 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 QRICH1Q2TAL8 776 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 IFIT1BQ5T764 474 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 RUFY2Q8WXA3 655 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 MPHOSPH6Q99547 160 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 PPP1R12CQ9BZL4 782 aa17.56■□□□□ 0.4
SHKBP1-226ENST00000600791 DHX16O60231 1041 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-226ENST00000600791 CYP21A2P08686 494 aa17.55■□□□□ 0.4
SHKBP1-226ENST00000600791 PSMC6P62333 389 aa17.55■□□□□ 0.4
SHKBP1-226ENST00000600791 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
SHKBP1-226ENST00000600791 CSF2RAP15509 400 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 TRDNQ13061 729 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 OR6J1Q8NGC5 347 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 SCFD2Q8WU76 684 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 TBC1D5Q92609 795 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 MAF1Q9H063 256 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 VAT1LQ9HCJ6 419 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 COL20A1Q9P218 1284 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
SHKBP1-226ENST00000600791 SGSM2O43147 1006 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 B4GALT4O60513 344 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 CPT1AP50416 773 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 PPIGQ13427 754 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 C16orf59Q7L2K0 433 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 FBXO11Q86XK2 927 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 TMEM199Q8N511 208 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 SYTL5Q8TDW5 730 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 SEZ6LQ9BYH1 1024 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 TRPV6Q9H1D0 765 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 POLR3EQ9NVU0 708 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 CUL9Q8IWT3 2517 aa17.53■□□□□ 0.4
SHKBP1-226ENST00000600791 UMODL1Q5DID0 1318 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 SCN10AQ9Y5Y9 1956 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 B4DLN1 442 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 NKRFO15226 690 aaKnown RBP eCLIP17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 ARIH2O95376 493 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 CYP2C18P33260 490 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 MRPL12P52815 198 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 PURAQ00577 322 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 MCF2L2Q86YR7 1114 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 COPS5Q92905 334 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 TAAR1Q96RJ0 339 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 TTYH1Q9H313 450 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 HIPK3Q9H422 1215 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.4
SHKBP1-226ENST00000600791 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms