RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 TDO2P48775 406 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CCDC144CPQ8IYA2 1237 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 GMCL1P1Q8NEA9 526 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 NEDD1Q8NHV4 660 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 AGBL1Q96MI9 1066 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 TOX2Q96NM4 488 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PURBQ96QR8 312 aaKnown RBP12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 HOMER2Q9NSB8 354 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 TMEM39AQ9NV64 488 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 FAM184BQ9ULE4 1060 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
MIA-RAB4B-201ENST00000600729 PRR23AA6NEV1 266 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 PROB1E7EW31 1015 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 GJA9P57773 515 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 BEX3Q00994 111 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 KRT40Q6A162 431 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 DGLUCYQ7Z3D6 616 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 FAM126BQ8IXS8 530 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 VWCEQ96DN2 955 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 DDX11Q96FC9 970 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 A1CFQ9NQ94 594 aaKnown RBP12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 GRIN2DO15399 1336 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TANC1Q9C0D5 1861 aa12.02□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TTLL1O95922 423 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TIMP1P01033 207 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ACRP10323 421 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 BMP3P12645 472 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 NKX3-2P78367 333 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TFAP4Q01664 338 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 CTDSPL2Q05D32 466 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 PPARAQ07869 468 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 MUM1L1Q5H9M0 696 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TMEM240Q5SV17 173 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ZMYM1Q5SVZ6 1142 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 VPS53Q5VIR6 699 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 PPP2R2DQ66LE6 453 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ATOH1Q92858 354 aaPredicted RBP12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ALG13Q9NP73 1137 aaKnown RBP12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 PDGFCQ9NRA1 345 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 GNEQ9Y223 722 aaKnown RBP12.01□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 LAMA4Q16363 1823 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 SCN10AQ9Y5Y9 1956 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ARVCFO00192 962 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 RFXAPO00287 272 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ZBED4O75132 1171 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 CD4P01730 458 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 HOXB3P14651 431 aaPredicted RBP12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 CSF2RAP15509 400 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 OAZ1P54368 228 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 MFSD5Q6N075 450 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 KCTD1Q719H9 257 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ZNF444Q8N0Y2 327 aaPredicted RBP12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ANKRD35Q8N283 1001 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 SLC43A3Q8NBI5 491 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 CHST13Q8NET6 341 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ABHD16BQ9H3Z7 469 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 RNF146Q9NTX7 359 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ELP1O95163 1332 aa12□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TET1Q8NFU7 2136 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 APPP05067 770 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ZFYP08048 801 aaPredicted RBP11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 SMPD1P17405 629 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 GNAT2P19087 354 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 MCCP23508 829 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 CYP2C18P33260 490 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 NOVP48745 357 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TAPT1Q6NXT6 567 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 CXCL17Q6UXB2 119 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 NUP133Q8WUM0 1156 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 GMCL1Q96IK5 515 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ACAD9Q9H845 621 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 SYNPO2Q9UMS6 1093 aa11.99□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 TTC41PQ6P2S7 1318 aa11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 A0A0U1RQG5 324 aaPredicted RBP11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 IL9P15248 144 aa11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 STAT2P52630 851 aa11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 CCDC174Q6PII3 467 aa11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 ZNF365Q70YC5 407 aa11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 FBXO16Q8IX29 292 aaPredicted RBP11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
MIA-RAB4B-201ENST00000600729 GLT1D1Q96MS3 346 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms