RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CTDP1Q9Y5B0 961 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-224ENST00000600718 ZNF536O15090 1300 aa20.03■□□□□ 0.8
SHKBP1-224ENST00000600718 SPDYE3A6NKU9 549 aa20.03■□□□□ 0.8
SHKBP1-224ENST00000600718 ERO1BQ86YB8 467 aa20.03■□□□□ 0.8
SHKBP1-224ENST00000600718 ELOA2Q8IYF1 753 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-224ENST00000600718 GCOM1H8Y6P7 765 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-224ENST00000600718 POLR2MP0CAP2 368 aa20.02■□□□□ 0.8
SHKBP1-224ENST00000600718 TAL1P17542 331 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-224ENST00000600718 SASS6Q6UVJ0 657 aa20.02■□□□□ 0.8
SHKBP1-224ENST00000600718 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.8
SHKBP1-224ENST00000600718 SYMPKQ92797 1274 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-224ENST00000600718 AGBL1Q96MI9 1066 aa20.02■□□□□ 0.8
SHKBP1-224ENST00000600718 PAPPA2Q9BXP8 1791 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 DSG3P32926 999 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 COG2Q14746 738 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 LONRF3Q496Y0 759 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 KRBA2Q6ZNG9 492 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 USP49Q70CQ1 688 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 EPSTI1Q96J88 318 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 RBSNQ9H1K0 784 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 VWA5AO00534 786 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 POLR2DO15514 142 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 MOXD1Q6UVY6 613 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 CNNM3Q8NE01 707 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 PYM1Q9BRP8 204 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 ELP3Q9H9T3 547 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 RRAGCQ9HB90 399 aa20.01■□□□□ 0.79
SHKBP1-224ENST00000600718 UTRNP46939 3433 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 CYP3A7-CYP3A51PA0A087WV96 503 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 CXCL11O14625 94 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 TDP2O95551 362 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 CFBP00751 764 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 CYP3A7P24462 503 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 SREBF1P36956 1147 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 TYRO3Q06418 890 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 CALCRLQ16602 461 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 CRYGNQ8WXF5 182 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 MTMR9Q96QG7 549 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 P2RX7Q99572 595 aaKnown RBP20■□□□□ 0.79
SHKBP1-224ENST00000600718 HOXC10Q9NYD6 342 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 USP25Q9UHP3 1055 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 HOOK1Q9UJC3 728 aaKnown RBP20■□□□□ 0.79
SHKBP1-224ENST00000600718 ADAMTS5Q9UNA0 930 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 MYPNQ86TC9 1320 aa20■□□□□ 0.79
SHKBP1-224ENST00000600718 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 SPDYE5A6NIY4 337 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 HOXA13P31271 388 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 ARHGAP4P98171 946 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 KANK3Q6NY19 840 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 MOB2Q70IA6 237 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 MCF2L2Q86YR7 1114 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 CPXCR1Q8N123 301 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 SAMD3Q8N6K7 520 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 ATG4CQ96DT6 458 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 AK8Q96MA6 479 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 RAVER2Q9HCJ3 691 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 DDX25Q9UHL0 483 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 UNCXA6NJT0 531 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 POTEIP0CG38 1075 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 POTEJP0CG39 1038 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 TXLNAP40222 546 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 LDLRAD1Q5T700 205 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 MAP1SQ66K74 1059 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 TBC1D5Q92609 795 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 CLMNQ96JQ2 1002 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 MBOAT7Q96N66 472 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 EHMT1Q9H9B1 1298 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 KIAA1468Q9P260 1216 aa19.99■□□□□ 0.79
SHKBP1-224ENST00000600718 SLC37A4O43826 429 aa19.98■□□□□ 0.79
SHKBP1-224ENST00000600718 OAZ1P54368 228 aa19.98■□□□□ 0.79
SHKBP1-224ENST00000600718 CLEC4DQ8WXI8 215 aa19.98■□□□□ 0.79
SHKBP1-224ENST00000600718 CCDC34Q96HJ3 373 aa19.98■□□□□ 0.79
SHKBP1-224ENST00000600718 MAP3K20Q9NYL2 800 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-224ENST00000600718 CYP3A4P08684 503 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 PPIL2Q13356 520 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 FCHSD1Q86WN1 690 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 PDILTQ8N807 584 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 PROCA1Q8NCQ7 364 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 OTUD5Q96G74 571 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 SERTAD1Q9UHV2 236 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 OTOFQ9HC10 1997 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 A0A0G2JLL6 359 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 XRCC6P12956 609 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 ALAS1P13196 640 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 HSD17B4P51659 736 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 GHRHRQ02643 423 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 PRRT2Q7Z6L0 340 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 REPS2Q8NFH8 660 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 CCSER1Q9C0I3 900 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 KCNH4Q9UQ05 1017 aa19.97■□□□□ 0.79
SHKBP1-224ENST00000600718 IRF6O14896 467 aa19.96■□□□□ 0.79
SHKBP1-224ENST00000600718 ACTN4O43707 911 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-224ENST00000600718 CIITAP33076 1130 aa19.96■□□□□ 0.79
SHKBP1-224ENST00000600718 TXKP42681 527 aa19.96■□□□□ 0.79
SHKBP1-224ENST00000600718 FXR2P51116 673 aaKnown RBP eCLIP19.96■□□□□ 0.79
SHKBP1-224ENST00000600718 TMEM266Q2M3C6 531 aa19.96■□□□□ 0.79
SHKBP1-224ENST00000600718 IQUBQ8NA54 791 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms