RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 RUNDC3BQ96NL0 473 aa15.9■□□□□ 0.14
SYMPK-215ENST00000600237 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
SYMPK-215ENST00000600237 TCP10L2B9ZVM9 353 aa15.9■□□□□ 0.14
SYMPK-215ENST00000600237 PRPF6O94906 941 aaKnown RBP15.9■□□□□ 0.14
SYMPK-215ENST00000600237 IFNB1P01574 187 aa15.9■□□□□ 0.14
SYMPK-215ENST00000600237 CERKLQ49MI3 558 aaPredicted RBP15.9■□□□□ 0.14
SYMPK-215ENST00000600237 ANKRD42Q8N9B4 389 aa15.9■□□□□ 0.14
SYMPK-215ENST00000600237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.89■□□□□ 0.13
SYMPK-215ENST00000600237 HADHQ16836 314 aaKnown RBP15.89■□□□□ 0.13
SYMPK-215ENST00000600237 ERFEQ4G0M1 354 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 LARP4BQ92615 738 aaKnown RBP15.89■□□□□ 0.13
SYMPK-215ENST00000600237 BEGAINQ9BUH8 593 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 RNF14Q9UBS8 474 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 CCDC151A5D8V7 595 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 PDE6CP51160 858 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 SARNPP82979 210 aaKnown RBP15.89■□□□□ 0.13
SYMPK-215ENST00000600237 POLA2Q14181 598 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 CASC4Q6P4E1 433 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 MIS12Q9H081 205 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 PCDHA4Q9UN74 947 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 GCFC2P16383 781 aaKnown RBP15.89■□□□□ 0.13
SYMPK-215ENST00000600237 NT5C2P49902 561 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 NECTIN1Q15223 517 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 RNF10Q8N5U6 811 aaKnown RBP15.89■□□□□ 0.13
SYMPK-215ENST00000600237 RSAD2Q8WXG1 361 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 P2RX5Q93086 422 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 PALLDQ8WX93 1383 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 MMP1P03956 469 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 GOLGA8HP0CJ92 632 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 ADCY8P40145 1251 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 LIFRP42702 1097 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 ASPRV1Q53RT3 343 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 PDE11AQ9HCR9 933 aa15.89■□□□□ 0.13
SYMPK-215ENST00000600237 hCG_1984214I3L0E3 225 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 K7ENM7 598 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 RESTQ13127 1097 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 SULF1Q8IWU6 871 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 ZNF713Q8N859 430 aaPredicted RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 GINS2Q9Y248 185 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 CAPN7Q9Y6W3 813 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 FRMPD2Q68DX3 1309 aaPredicted RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 ICA1Q05084 483 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 SEPT6Q14141 434 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 ZNF658Q5TYW1 1059 aaPredicted RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 CTAGE3PQ8IX95 158 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 PALM2Q8IXS6 379 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 LRRC47Q8N1G4 583 aaKnown RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 TEKT3Q9BXF9 490 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 STK17AQ9UEE5 414 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 LMNB1P20700 586 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 FKBP3Q00688 224 aaKnown RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 MAN2A1Q16706 1144 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 MCF2L2Q86YR7 1114 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 DCPSQ96C86 337 aaKnown RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 KRT12Q99456 494 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 DPH5Q9H2P9 285 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 PLEKHA4Q9H4M7 779 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 PCDHA1Q9Y5I3 950 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 PASKQ96RG2 1323 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 GUCY2DQ02846 1103 aa15.88■□□□□ 0.13
SYMPK-215ENST00000600237 RAB3IPQ96QF0 476 aaPredicted RBP15.88■□□□□ 0.13
SYMPK-215ENST00000600237 POLR2BP30876 1174 aaKnown RBP15.87■□□□□ 0.13
SYMPK-215ENST00000600237 ATP1A2P50993 1020 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 KCNQ4P56696 695 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 EHHADHQ08426 723 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 ARMCX5Q6P1M9 558 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 LIG4P49917 911 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 EPHB4P54760 987 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 BPIFB4P59827 614 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 SLFN13Q68D06 897 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.87■□□□□ 0.13
SYMPK-215ENST00000600237 MGARPQ8TDB4 240 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 HAUS2Q9NVX0 235 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 SH2B2O14492 632 aaPredicted RBP15.87■□□□□ 0.13
SYMPK-215ENST00000600237 FAM102BQ5T8I3 360 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 MAP3K21Q5TCX8 1036 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 PLA2G4DQ86XP0 818 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 ZBTB8OSQ8IWT0 167 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 PPM1KQ8N3J5 372 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 ANKRD13CQ8N6S4 541 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 HAUS1Q96CS2 278 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 AMNQ9BXJ7 453 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 CPSF2Q9P2I0 782 aaKnown RBP15.87■□□□□ 0.13
SYMPK-215ENST00000600237 IQGAP3Q86VI3 1631 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 MAN1A1P33908 653 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 PTPN12Q05209 780 aaKnown RBP15.87■□□□□ 0.13
SYMPK-215ENST00000600237 PABPC4Q13310 644 aaKnown RBP eCLIP15.87■□□□□ 0.132e-12■■■■□ 20.2
SYMPK-215ENST00000600237 XKR9Q5GH70 373 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 VSTM4Q8IW00 320 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 RABGAP1Q9Y3P9 1069 aa15.87■□□□□ 0.13
SYMPK-215ENST00000600237 CCDC170Q8IYT3 715 aa15.86■□□□□ 0.13
SYMPK-215ENST00000600237 NUF2Q9BZD4 464 aa15.86■□□□□ 0.13
SYMPK-215ENST00000600237 FAM114A2Q9NRY5 505 aa15.86■□□□□ 0.13
SYMPK-215ENST00000600237 SLC5A4Q9NY91 659 aa15.86■□□□□ 0.13
SYMPK-215ENST00000600237 CDC42BPGQ6DT37 1551 aa15.86■□□□□ 0.13
SYMPK-215ENST00000600237 M0R2C6 588 aa15.86■□□□□ 0.13
SYMPK-215ENST00000600237 THAP12O43422 761 aa15.86■□□□□ 0.13
SYMPK-215ENST00000600237 HIP1RO75146 1068 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms