RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 GSPT1P15170 499 aaKnown RBP21.95■■□□□ 1.1
PNKP-213ENST00000599543 CALML3P27482 149 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 EPHB4P54760 987 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 PWP2Q15269 919 aaKnown RBP21.95■■□□□ 1.1
PNKP-213ENST00000599543 IMMTQ16891 758 aaKnown RBP21.95■■□□□ 1.1
PNKP-213ENST00000599543 CXCL17Q6UXB2 119 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 SLC30A10Q6XR72 485 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 RNF207Q6ZRF8 634 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 KIAA1211Q6ZU35 1233 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 GUCD1Q96NT3 240 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 KAT14Q9H8E8 782 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 CTNNA3Q9UI47 895 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 GOLGA8HP0CJ92 632 aa21.94■■□□□ 1.1
PNKP-213ENST00000599543 FAM126BQ8IXS8 530 aa21.94■■□□□ 1.1
PNKP-213ENST00000599543 PNMA1Q8ND90 353 aa21.94■■□□□ 1.1
PNKP-213ENST00000599543 CLEC4DQ8WXI8 215 aa21.94■■□□□ 1.1
PNKP-213ENST00000599543 MPHOSPH6Q99547 160 aaKnown RBP21.94■■□□□ 1.1
PNKP-213ENST00000599543 Q9Y3F1 56 aa21.94■■□□□ 1.1
PNKP-213ENST00000599543 CUL9Q8IWT3 2517 aa21.94■■□□□ 1.1
PNKP-213ENST00000599543 B4E1Z4 1266 aa21.93■■□□□ 1.1
PNKP-213ENST00000599543 PTGS1P23219 599 aa21.93■■□□□ 1.1
PNKP-213ENST00000599543 TTC22Q5TAA0 569 aa21.93■■□□□ 1.1
PNKP-213ENST00000599543 MFSD5Q6N075 450 aa21.93■■□□□ 1.1
PNKP-213ENST00000599543 ZSCAN10Q96SZ4 725 aaPredicted RBP21.93■■□□□ 1.1
PNKP-213ENST00000599543 RPS6P62753 249 aaKnown RBP21.92■■□□□ 1.1
PNKP-213ENST00000599543 PPIGQ13427 754 aaKnown RBP eCLIP21.92■■□□□ 1.17e-8■■■■□ 23.1
PNKP-213ENST00000599543 USH1GQ495M9 461 aa21.92■■□□□ 1.1
PNKP-213ENST00000599543 DUSP28Q4G0W2 176 aa21.92■■□□□ 1.1
PNKP-213ENST00000599543 WDR11Q9BZH6 1224 aa21.92■■□□□ 1.1
PNKP-213ENST00000599543 PPP1R12CQ9BZL4 782 aa21.92■■□□□ 1.1
PNKP-213ENST00000599543 TNKSO95271 1327 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 PDE4DQ08499 809 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 ITGA7Q13683 1181 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 TMEM63BQ5T3F8 832 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 TMEM199Q8N511 208 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 ENAHQ8N8S7 591 aaPredicted RBP21.91■■□□□ 1.1
PNKP-213ENST00000599543 KRT23Q9C075 422 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 UBA5Q9GZZ9 404 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 CPVLQ9H3G5 476 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 CNNM2Q9H8M5 875 aa21.91■■□□□ 1.1
PNKP-213ENST00000599543 CD4P01730 458 aa21.9■■□□□ 1.1
PNKP-213ENST00000599543 CDC37Q16543 378 aaPredicted RBP21.9■■□□□ 1.1
PNKP-213ENST00000599543 ASPRV1Q53RT3 343 aa21.9■■□□□ 1.1
PNKP-213ENST00000599543 SLC43A3Q8NBI5 491 aa21.9■■□□□ 1.1
PNKP-213ENST00000599543 DNERQ8NFT8 737 aa21.9■■□□□ 1.1
PNKP-213ENST00000599543 UBAC1Q9BSL1 405 aa21.9■■□□□ 1.1
PNKP-213ENST00000599543 SEZ6LQ9BYH1 1024 aa21.9■■□□□ 1.1
PNKP-213ENST00000599543 ZSWIM5Q9P217 1185 aa21.9■■□□□ 1.1
PNKP-213ENST00000599543 B4DLN1 442 aa21.89■■□□□ 1.09
PNKP-213ENST00000599543 CSF2RAP15509 400 aa21.89■■□□□ 1.09
PNKP-213ENST00000599543 MRPL12P52815 198 aaKnown RBP21.89■■□□□ 1.09
PNKP-213ENST00000599543 ANKS1AQ92625 1134 aa21.89■■□□□ 1.09
PNKP-213ENST00000599543 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.89■■□□□ 1.091e-8■■■■□ 20.4
PNKP-213ENST00000599543 SEMA6BQ9H3T3 888 aa21.89■■□□□ 1.09
PNKP-213ENST00000599543 PPP4R2Q9NY27 417 aa21.89■■□□□ 1.09
PNKP-213ENST00000599543 DHX16O60231 1041 aaKnown RBP21.88■■□□□ 1.09
PNKP-213ENST00000599543 PARP1P09874 1014 aaKnown RBP21.88■■□□□ 1.09
PNKP-213ENST00000599543 CPT1AP50416 773 aa21.88■■□□□ 1.09
PNKP-213ENST00000599543 PSMC6P62333 389 aa21.88■■□□□ 1.09
PNKP-213ENST00000599543 PPP2R5BQ15173 497 aa21.88■■□□□ 1.09
PNKP-213ENST00000599543 ADGRF4Q8IZF3 695 aa21.88■■□□□ 1.09
PNKP-213ENST00000599543 CDX2Q99626 313 aaPredicted RBP21.88■■□□□ 1.09
PNKP-213ENST00000599543 HIPK3Q9H422 1215 aa21.88■■□□□ 1.09
PNKP-213ENST00000599543 PRUNE2Q8WUY3 3088 aa21.88■■□□□ 1.09
PNKP-213ENST00000599543 GRIN2DO15399 1336 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 ABCB11O95342 1321 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 RAD50Q92878 1312 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 TMEM265A0A087WTH1 108 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.87■■□□□ 1.09
PNKP-213ENST00000599543 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.87■■□□□ 1.09
PNKP-213ENST00000599543 RBM47A0AV96 593 aaKnown RBP21.87■■□□□ 1.09
PNKP-213ENST00000599543 EDNRBP24530 442 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 IFIT1BQ5T764 474 aaKnown RBP21.87■■□□□ 1.09
PNKP-213ENST00000599543 PSRC1Q6PGN9 363 aaPredicted RBP21.87■■□□□ 1.09
PNKP-213ENST00000599543 OR6J1Q8NGC5 347 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 SCFD2Q8WU76 684 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 IL25Q9H293 177 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 TTYH1Q9H313 450 aaPredicted RBP21.87■■□□□ 1.09
PNKP-213ENST00000599543 POLR3EQ9NVU0 708 aa21.87■■□□□ 1.09
PNKP-213ENST00000599543 KIAA1217Q5T5P2 1943 aa21.86■■□□□ 1.09
PNKP-213ENST00000599543 VCANP13611 3396 aa21.86■■□□□ 1.09
PNKP-213ENST00000599543 DLL1O00548 723 aa21.86■■□□□ 1.09
PNKP-213ENST00000599543 NKRFO15226 690 aaKnown RBP eCLIP21.86■■□□□ 1.09
PNKP-213ENST00000599543 CYP2C18P33260 490 aa21.86■■□□□ 1.09
PNKP-213ENST00000599543 BRDTQ58F21 947 aaPredicted RBP21.86■■□□□ 1.09
PNKP-213ENST00000599543 RGS22Q8NE09 1264 aa21.86■■□□□ 1.09
PNKP-213ENST00000599543 GPHNQ9NQX3 736 aaPredicted RBP21.86■■□□□ 1.09
PNKP-213ENST00000599543 SCN10AQ9Y5Y9 1956 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 B4GALT4O60513 344 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 MYL3P08590 195 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 DNAJB2P25686 324 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 TMEM240Q5SV17 173 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 C16orf59Q7L2K0 433 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 RUFY2Q8WXA3 655 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 MAF1Q9H063 256 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 TRPV6Q9H1D0 765 aa21.85■■□□□ 1.09
PNKP-213ENST00000599543 ACRP10323 421 aa21.84■■□□□ 1.09
PNKP-213ENST00000599543 PURAQ00577 322 aaKnown RBP21.84■■□□□ 1.09
PNKP-213ENST00000599543 TRDNQ13061 729 aa21.84■■□□□ 1.09
PNKP-213ENST00000599543 QRICH1Q2TAL8 776 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms