RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 UMODL1Q5DID0 1318 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 MYH6P13533 1939 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 FGAP02671 866 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 SLC16A2P36021 539 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 PDE1AP54750 535 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 MCMDC2Q4G0Z9 681 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 MPHOSPH6Q99547 160 aaKnown RBP24.93■■□□□ 1.58
PNKP-212ENST00000599454 WDR11Q9BZH6 1224 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 PRDM12Q9H4Q4 367 aa24.93■■□□□ 1.58
PNKP-212ENST00000599454 CXXC1Q9P0U4 656 aaPredicted RBP24.93■■□□□ 1.58
PNKP-212ENST00000599454 SCN5AQ14524 2016 aa24.92■■□□□ 1.58
PNKP-212ENST00000599454 RBM47A0AV96 593 aaKnown RBP24.92■■□□□ 1.58
PNKP-212ENST00000599454 SUPT20HL2P0C7V6 817 aa24.92■■□□□ 1.58
PNKP-212ENST00000599454 PCP11498 1178 aaKnown RBP24.92■■□□□ 1.58
PNKP-212ENST00000599454 PTGS1P23219 599 aa24.92■■□□□ 1.58
PNKP-212ENST00000599454 CPT1AP50416 773 aa24.92■■□□□ 1.58
PNKP-212ENST00000599454 CCL23P55773 120 aa24.92■■□□□ 1.58
PNKP-212ENST00000599454 PSMC6P62333 389 aa24.92■■□□□ 1.58
PNKP-212ENST00000599454 RRP12Q5JTH9 1297 aaKnown RBP24.92■■□□□ 1.58
PNKP-212ENST00000599454 TTC14Q96N46 770 aa24.92■■□□□ 1.58
PNKP-212ENST00000599454 PURBQ96QR8 312 aaKnown RBP24.92■■□□□ 1.58
PNKP-212ENST00000599454 ALDH8A1Q9H2A2 487 aaPredicted RBP24.92■■□□□ 1.58
PNKP-212ENST00000599454 PTPDC1A2A3K4 754 aa24.91■■□□□ 1.58
PNKP-212ENST00000599454 NFIBO00712 420 aa24.91■■□□□ 1.58
PNKP-212ENST00000599454 TMEM63BQ5T3F8 832 aa24.91■■□□□ 1.58
PNKP-212ENST00000599454 OTOP2Q7RTS6 562 aa24.91■■□□□ 1.58
PNKP-212ENST00000599454 WNT8AQ9H1J5 351 aa24.91■■□□□ 1.58
PNKP-212ENST00000599454 SLC28A3Q9HAS3 691 aa24.91■■□□□ 1.58
PNKP-212ENST00000599454 GPCPD1Q9NPB8 672 aa24.91■■□□□ 1.58
PNKP-212ENST00000599454 FRMPD2Q68DX3 1309 aaPredicted RBP24.9■■□□□ 1.58
PNKP-212ENST00000599454 WDR19Q8NEZ3 1342 aa24.9■■□□□ 1.58
PNKP-212ENST00000599454 NKRFO15226 690 aaKnown RBP eCLIP24.9■■□□□ 1.58
PNKP-212ENST00000599454 PFKMP08237 780 aa24.9■■□□□ 1.58
PNKP-212ENST00000599454 HSPD1P10809 573 aaKnown RBP24.9■■□□□ 1.58
PNKP-212ENST00000599454 PDHBP11177 359 aa24.9■■□□□ 1.58
PNKP-212ENST00000599454 BRDTQ58F21 947 aaPredicted RBP24.9■■□□□ 1.58
PNKP-212ENST00000599454 RNF207Q6ZRF8 634 aa24.9■■□□□ 1.58
PNKP-212ENST00000599454 PRDM6Q9NQX0 595 aa24.9■■□□□ 1.58
PNKP-212ENST00000599454 TANC1Q9C0D5 1861 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 RAD50Q92878 1312 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 LAMA4Q16363 1823 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 A0A0D9SFI3 127 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 B4DLN1 442 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 MRPL12P52815 198 aaKnown RBP24.89■■□□□ 1.58
PNKP-212ENST00000599454 PURAQ00577 322 aaKnown RBP24.89■■□□□ 1.58
PNKP-212ENST00000599454 HDAC1Q13547 482 aaPredicted RBP24.89■■□□□ 1.58
PNKP-212ENST00000599454 ATXN2LQ8WWM7 1075 aaKnown RBP24.89■■□□□ 1.58
PNKP-212ENST00000599454 CLEC4DQ8WXI8 215 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 FAM227BQ96M60 508 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 MTG1Q9BT17 334 aaPredicted RBP24.89■■□□□ 1.58
PNKP-212ENST00000599454 NKX2-4Q9H2Z4 354 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 GPHNQ9NQX3 736 aaPredicted RBP24.89■■□□□ 1.58
PNKP-212ENST00000599454 SLC4A7Q9Y6M7 1214 aa24.89■■□□□ 1.58
PNKP-212ENST00000599454 TRIP12Q14669 1992 aaPredicted RBP24.89■■□□□ 1.57
PNKP-212ENST00000599454 KIAA1217Q5T5P2 1943 aa24.88■■□□□ 1.57
PNKP-212ENST00000599454 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
PNKP-212ENST00000599454 ZNF543Q08ER8 600 aa24.88■■□□□ 1.57
PNKP-212ENST00000599454 SLC30A10Q6XR72 485 aa24.88■■□□□ 1.57
PNKP-212ENST00000599454 DNERQ8NFT8 737 aa24.88■■□□□ 1.57
PNKP-212ENST00000599454 OR6J1Q8NGC5 347 aa24.88■■□□□ 1.57
PNKP-212ENST00000599454 TNKSO95271 1327 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 CHD9Q3L8U1 2897 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 KPNA6O60684 536 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 SNHG28P0DPA3 235 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 CALML3P27482 149 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 NT5C2P49902 561 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 PDE4DQ08499 809 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 PPP2R5BQ15173 497 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 MFSD6Q6ZSS7 791 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 SCFD2Q8WU76 684 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 RNF41Q9H4P4 317 aaPredicted RBP24.87■■□□□ 1.57
PNKP-212ENST00000599454 THEGQ9P2T0 379 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 YBX2Q9Y2T7 364 aaKnown RBP24.87■■□□□ 1.57
PNKP-212ENST00000599454 PCDHA11Q9Y5I1 949 aa24.87■■□□□ 1.57
PNKP-212ENST00000599454 CCDC171Q6TFL3 1326 aa24.86■■□□□ 1.57
PNKP-212ENST00000599454 SPTBN5Q9NRC6 3674 aaKnown RBP24.86■■□□□ 1.57
PNKP-212ENST00000599454 MYL3P08590 195 aa24.86■■□□□ 1.57
PNKP-212ENST00000599454 EDNRBP24530 442 aa24.86■■□□□ 1.57
PNKP-212ENST00000599454 RPS6P62753 249 aaKnown RBP24.86■■□□□ 1.57
PNKP-212ENST00000599454 ADGRE1Q14246 886 aa24.86■■□□□ 1.57
PNKP-212ENST00000599454 PPM1EQ8WY54 764 aa24.86■■□□□ 1.57
PNKP-212ENST00000599454 MAF1Q9H063 256 aa24.86■■□□□ 1.57
PNKP-212ENST00000599454 TRMT13Q9NUP7 481 aaKnown RBP24.86■■□□□ 1.57
PNKP-212ENST00000599454 RFC2P35250 354 aa24.85■■□□□ 1.57
PNKP-212ENST00000599454 MFAP1P55081 439 aaKnown RBP24.85■■□□□ 1.57
PNKP-212ENST00000599454 HAND2P61296 217 aa24.85■■□□□ 1.57
PNKP-212ENST00000599454 NMIQ13287 307 aaPredicted RBP24.85■■□□□ 1.57
PNKP-212ENST00000599454 GPATCH4Q5T3I0 446 aaKnown RBP24.85■■□□□ 1.57
PNKP-212ENST00000599454 SCLYQ96I15 445 aa24.85■■□□□ 1.57
PNKP-212ENST00000599454 TNFRSF10AO00220 468 aa24.84■■□□□ 1.57
PNKP-212ENST00000599454 IGFBP4P22692 258 aa24.84■■□□□ 1.57
PNKP-212ENST00000599454 PTPN11Q06124 597 aaPredicted RBP24.84■■□□□ 1.57
PNKP-212ENST00000599454 PPP2R2DQ66LE6 453 aa24.84■■□□□ 1.57
PNKP-212ENST00000599454 NFRKBQ6P4R8 1299 aa24.84■■□□□ 1.57
PNKP-212ENST00000599454 ZNF589Q86UQ0 364 aaPredicted RBP24.84■■□□□ 1.57
PNKP-212ENST00000599454 RGS22Q8NE09 1264 aa24.84■■□□□ 1.57
PNKP-212ENST00000599454 VWCEQ96DN2 955 aa24.84■■□□□ 1.57
PNKP-212ENST00000599454 TET1Q8NFU7 2136 aa24.83■■□□□ 1.57
PNKP-212ENST00000599454 A6NJR5 290 aa24.83■■□□□ 1.57
PNKP-212ENST00000599454 ZBBXA8MT70 800 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms