RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 BRDTQ58F21 947 aaPredicted RBP17.16■□□□□ 0.34
EBI3-202ENST00000599339 CCDC178Q5BJE1 867 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
EBI3-202ENST00000599339 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 SMC5Q8IY18 1101 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 TIFAQ96CG3 184 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 PURBQ96QR8 312 aaKnown RBP17.16■□□□□ 0.34
EBI3-202ENST00000599339 WDR11Q9BZH6 1224 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 IL23AQ9NPF7 189 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 WDR19Q8NEZ3 1342 aa17.16■□□□□ 0.34
EBI3-202ENST00000599339 ZNF213O14771 459 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 CYP2C18P33260 490 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 CPT1AP50416 773 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 ZNF365Q70YC5 407 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 C16orf59Q7L2K0 433 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 IQCA1Q86XH1 822 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 COL25A1Q9BXS0 654 aaPredicted RBP17.15■□□□□ 0.34
EBI3-202ENST00000599339 ZNF576Q9H609 170 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 DIAPH3Q9NSV4 1193 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 UNC80Q8N2C7 3258 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 RAD50Q92878 1312 aa17.15■□□□□ 0.34
EBI3-202ENST00000599339 LCTP09848 1927 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 HIP1O00291 1037 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 NKRFO15226 690 aaKnown RBP eCLIP17.14■□□□□ 0.33
EBI3-202ENST00000599339 FGBP02675 491 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 ACRP10323 421 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 PDE4DQ08499 809 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 RAB30Q15771 203 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 RASIP1Q5U651 963 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 SLC30A10Q6XR72 485 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 DGKHQ86XP1 1220 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 TBC1D10CQ8IV04 446 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 DNERQ8NFT8 737 aa17.14■□□□□ 0.33
EBI3-202ENST00000599339 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
EBI3-202ENST00000599339 SUPT20HL2P0C7V6 817 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 PSMC6P62333 389 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 RPS6P62753 249 aaKnown RBP17.13■□□□□ 0.33
EBI3-202ENST00000599339 GRIN2CQ14957 1233 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 PPP2R5BQ15173 497 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 RPUSD2Q8IZ73 545 aaKnown RBP17.13■□□□□ 0.33
EBI3-202ENST00000599339 CLEC4DQ8WXI8 215 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 HERVK_113Q902F9 699 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 OSBPL3Q9H4L5 887 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 MSRAQ9UJ68 235 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 GRIN2DO15399 1336 aa17.13■□□□□ 0.33
EBI3-202ENST00000599339 RBM47A0AV96 593 aaKnown RBP17.12■□□□□ 0.33
EBI3-202ENST00000599339 B4GALT4O60513 344 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 PTGS1P23219 599 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 CWC27Q6UX04 472 aaKnown RBP17.12■□□□□ 0.33
EBI3-202ENST00000599339 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 OR6J1Q8NGC5 347 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 GAS2L1Q99501 681 aaPredicted RBP17.12■□□□□ 0.33
EBI3-202ENST00000599339 ZKSCAN3Q9BRR0 538 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 MTG1Q9BT17 334 aaPredicted RBP17.12■□□□□ 0.33
EBI3-202ENST00000599339 NOC4LQ9BVI4 516 aaKnown RBP17.12■□□□□ 0.33
EBI3-202ENST00000599339 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 MAF1Q9H063 256 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 TRPV6Q9H1D0 765 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 ALDH8A1Q9H2A2 487 aaPredicted RBP17.12■□□□□ 0.33
EBI3-202ENST00000599339 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 NEDD4P46934 1319 aa17.12■□□□□ 0.33
EBI3-202ENST00000599339 KPNA6O60684 536 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 MYL3P08590 195 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 CCL23P55773 120 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 NUCB1Q02818 461 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 TMEM63BQ5T3F8 832 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 UMODL1Q5DID0 1318 aa17.11■□□□□ 0.33
EBI3-202ENST00000599339 GRXCR1A8MXD5 290 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 KDM4AO75164 1064 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 GOLGA8HP0CJ92 632 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 EDNRBP24530 442 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
EBI3-202ENST00000599339 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
EBI3-202ENST00000599339 USH1GQ495M9 461 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 TNKSO95271 1327 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
EBI3-202ENST00000599339 PFKMP08237 780 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 PBX2P40425 430 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 TTLL4Q14679 1199 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
EBI3-202ENST00000599339 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 ANKS1AQ92625 1134 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 SYMPKQ92797 1274 aaKnown RBP17.09■□□□□ 0.33
EBI3-202ENST00000599339 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
EBI3-202ENST00000599339 DSCC1Q9BVC3 393 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 KRT23Q9C075 422 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 WNT8AQ9H1J5 351 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 SLC28A3Q9HAS3 691 aa17.09■□□□□ 0.33
EBI3-202ENST00000599339 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
EBI3-202ENST00000599339 CXXC1Q9P0U4 656 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms