RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 GJA9P57773 515 aa19.37■□□□□ 0.69
USHBP1-208ENST00000598309 RTP1P59025 263 aa19.37■□□□□ 0.69
USHBP1-208ENST00000598309 TNFAIP2Q03169 654 aa19.37■□□□□ 0.69
USHBP1-208ENST00000598309 SLC39A5Q6ZMH5 540 aa19.37■□□□□ 0.69
USHBP1-208ENST00000598309 FBXO16Q8IX29 292 aaPredicted RBP19.37■□□□□ 0.69
USHBP1-208ENST00000598309 ZMYND8Q9ULU4 1186 aaPredicted RBP19.37■□□□□ 0.69
USHBP1-208ENST00000598309 A0A1W2PQ45 241 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-208ENST00000598309 A0A1W2PQY0 241 aa19.36■□□□□ 0.69
USHBP1-208ENST00000598309 KIF5BP33176 963 aa19.36■□□□□ 0.69
USHBP1-208ENST00000598309 GHRHRQ02643 423 aa19.36■□□□□ 0.69
USHBP1-208ENST00000598309 SLC35G1Q2M3R5 365 aa19.36■□□□□ 0.69
USHBP1-208ENST00000598309 IQSEC1Q6DN90 963 aa19.36■□□□□ 0.69
USHBP1-208ENST00000598309 CCSAPQ6IQ19 270 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-208ENST00000598309 TAPT1Q6NXT6 567 aa19.36■□□□□ 0.69
USHBP1-208ENST00000598309 PCSK9Q8NBP7 692 aaKnown RBP19.36■□□□□ 0.69
USHBP1-208ENST00000598309 GNEQ9Y223 722 aaKnown RBP19.36■□□□□ 0.69
USHBP1-208ENST00000598309 Q9Y3F1 56 aa19.36■□□□□ 0.69
USHBP1-208ENST00000598309 DDX49Q9Y6V7 483 aaKnown RBP19.36■□□□□ 0.69
USHBP1-208ENST00000598309 CCDC69A6NI79 296 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 C6orf222P0C671 652 aaPredicted RBP19.35■□□□□ 0.69
USHBP1-208ENST00000598309 SMARCA1P28370 1054 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 ACLYP53396 1101 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 KRT32Q14532 448 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 NFXL1Q6ZNB6 911 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 SGMS1Q86VZ5 419 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 CTCFLQ8NI51 663 aaPredicted RBP19.35■□□□□ 0.69
USHBP1-208ENST00000598309 SYTL5Q8TDW5 730 aaPredicted RBP19.35■□□□□ 0.69
USHBP1-208ENST00000598309 NUP133Q8WUM0 1156 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 FERMT2Q96AC1 680 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 NEK1Q96PY6 1258 aa19.35■□□□□ 0.69
USHBP1-208ENST00000598309 GPHNQ9NQX3 736 aaPredicted RBP19.35■□□□□ 0.69
USHBP1-208ENST00000598309 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-208ENST00000598309 A0A1W2PPC1 479 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 RBM47A0AV96 593 aaKnown RBP19.34■□□□□ 0.69
USHBP1-208ENST00000598309 MYADML2A6NDP7 307 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 CYTH3O43739 400 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 PPP1R11O60927 126 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-208ENST00000598309 CALM1P0DP23 149 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 CALM2P0DP24 149 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 CALM3P0DP25 149 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 SMPD1P17405 629 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 GNAQP50148 359 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 PDE4DQ08499 809 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 COL9A3Q14050 684 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-208ENST00000598309 NOL8Q76FK4 1167 aaKnown RBP19.34■□□□□ 0.69
USHBP1-208ENST00000598309 EEPD1Q7L9B9 569 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 TLK2Q86UE8 772 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 HOMER1Q86YM7 354 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 SAMD3Q8N6K7 520 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 PIGSQ96S52 555 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 GDF15Q99988 308 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 LZTS2Q9BRK4 669 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 SPZ1Q9BXG8 430 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 PDGFCQ9NRA1 345 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 MAP3K20Q9NYL2 800 aaKnown RBP19.34■□□□□ 0.69
USHBP1-208ENST00000598309 RBM27Q9P2N5 1060 aaKnown RBP19.34■□□□□ 0.69
USHBP1-208ENST00000598309 PCDHA1Q9Y5I3 950 aa19.34■□□□□ 0.69
USHBP1-208ENST00000598309 PNMA6FA0A0J9YX94 578 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 CTAGE5O15320 804 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 SYN1P17600 705 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 BMP8BP34820 402 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 HSD17B4P51659 736 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 KCNA10Q16322 511 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 TRIM60Q495X7 471 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 RASEFQ8IZ41 740 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 NSUN6Q8TEA1 469 aaKnown RBP19.33■□□□□ 0.68
USHBP1-208ENST00000598309 KCNB2Q92953 911 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 MYL10Q9BUA6 226 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 STARD7Q9NQZ5 370 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 ATP11BQ9Y2G3 1177 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.68
USHBP1-208ENST00000598309 ELP1O95163 1332 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 MYH6P13533 1939 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 OPLAHO14841 1288 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 REC8O95072 547 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 HMGB1P09429 215 aaKnown RBP19.32■□□□□ 0.68
USHBP1-208ENST00000598309 DUSP28Q4G0W2 176 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 GNASQ5JWF2 1037 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
USHBP1-208ENST00000598309 TBC1D5Q92609 795 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 GLT1D1Q96MS3 346 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 IWS1Q96ST2 819 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 COL20A1Q9P218 1284 aa19.32■□□□□ 0.68
USHBP1-208ENST00000598309 EPB41L2O43491 1005 aaKnown RBP19.31■□□□□ 0.68
USHBP1-208ENST00000598309 ASGR1P07306 291 aa19.31■□□□□ 0.68
USHBP1-208ENST00000598309 HSPA4P34932 840 aa19.31■□□□□ 0.68
USHBP1-208ENST00000598309 MAGEA10P43363 369 aaPredicted RBP19.31■□□□□ 0.68
USHBP1-208ENST00000598309 EXOSC10Q01780 885 aaKnown RBP19.31■□□□□ 0.68
USHBP1-208ENST00000598309 FSCN1Q16658 493 aaKnown RBP19.31■□□□□ 0.68
USHBP1-208ENST00000598309 SCFD2Q8WU76 684 aa19.31■□□□□ 0.68
USHBP1-208ENST00000598309 RMDN3Q96TC7 470 aa19.31■□□□□ 0.68
USHBP1-208ENST00000598309 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
USHBP1-208ENST00000598309 PRKAG2Q9UGJ0 569 aa19.31■□□□□ 0.68
USHBP1-208ENST00000598309 TRIOBPQ9H2D6 2365 aa19.3■□□□□ 0.68
USHBP1-208ENST00000598309 NKRFO15226 690 aaKnown RBP eCLIP19.3■□□□□ 0.68
USHBP1-208ENST00000598309 ZEB2O60315 1214 aa19.3■□□□□ 0.68
USHBP1-208ENST00000598309 CFBP00751 764 aa19.3■□□□□ 0.68
USHBP1-208ENST00000598309 ADCK5Q3MIX3 580 aa19.3■□□□□ 0.68
USHBP1-208ENST00000598309 RRP36Q96EU6 259 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms