RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 EEPD1Q7L9B9 569 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 MICU3Q86XE3 530 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 ARRDC4Q8NCT1 418 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 SYTL5Q8TDW5 730 aaPredicted RBP26.46■■□□□ 1.83
IRF3-220ENST00000598108 SPZ1Q9BXG8 430 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 XPNPEP3Q9NQH7 507 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 COL20A1Q9P218 1284 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 ADD3Q9UEY8 706 aaKnown RBP26.46■■□□□ 1.83
IRF3-220ENST00000598108 DNM1LO00429 736 aa26.45■■□□□ 1.82
IRF3-220ENST00000598108 SMARCA1P28370 1054 aa26.45■■□□□ 1.82
IRF3-220ENST00000598108 GNAQP50148 359 aa26.45■■□□□ 1.82
IRF3-220ENST00000598108 MCF2L2Q86YR7 1114 aa26.45■■□□□ 1.82
IRF3-220ENST00000598108 LZTS2Q9BRK4 669 aa26.45■■□□□ 1.82
IRF3-220ENST00000598108 PDGFCQ9NRA1 345 aa26.45■■□□□ 1.82
IRF3-220ENST00000598108 TAPT1Q6NXT6 567 aa26.44■■□□□ 1.82
IRF3-220ENST00000598108 BLOC1S2Q6QNY1 142 aa26.44■■□□□ 1.82
IRF3-220ENST00000598108 FBXO16Q8IX29 292 aaPredicted RBP26.44■■□□□ 1.82
IRF3-220ENST00000598108 TAAR1Q96RJ0 339 aa26.44■■□□□ 1.82
IRF3-220ENST00000598108 SENP6Q9GZR1 1112 aaPredicted RBP26.44■■□□□ 1.82
IRF3-220ENST00000598108 MAF1Q9H063 256 aa26.44■■□□□ 1.82
IRF3-220ENST00000598108 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.43■■□□□ 1.82
IRF3-220ENST00000598108 RPS6KB1P23443 525 aa26.43■■□□□ 1.82
IRF3-220ENST00000598108 IRX5P78411 483 aaPredicted RBP26.43■■□□□ 1.82
IRF3-220ENST00000598108 PRPF38BQ5VTL8 546 aaKnown RBP26.43■■□□□ 1.82
IRF3-220ENST00000598108 SYNE3Q6ZMZ3 975 aa26.43■■□□□ 1.82
IRF3-220ENST00000598108 Q6ZUG5 572 aa26.43■■□□□ 1.82
IRF3-220ENST00000598108 CCDC82Q8N4S0 544 aa26.43■■□□□ 1.82
IRF3-220ENST00000598108 DNERQ8NFT8 737 aa26.43■■□□□ 1.82
IRF3-220ENST00000598108 KLF18A0A0U1RQI7 1052 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 ADAMTS4O75173 837 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 DUSP11O75319 330 aaKnown RBP26.42■■□□□ 1.82
IRF3-220ENST00000598108 CFBP00751 764 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 CASTP20810 708 aaKnown RBP26.42■■□□□ 1.82
IRF3-220ENST00000598108 PTGS1P23219 599 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 EDNRBP24530 442 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 ADCYAP1R1P41586 468 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 TMEM63BQ5T3F8 832 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 TMTC3Q6ZXV5 915 aa26.42■■□□□ 1.82
IRF3-220ENST00000598108 RRP36Q96EU6 259 aaKnown RBP26.42■■□□□ 1.82
IRF3-220ENST00000598108 BAZ2BQ9UIF8 2168 aaKnown RBP26.41■■□□□ 1.82
IRF3-220ENST00000598108 LOC102724159A0A0B4J2E5 919 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 hCG_1642624A0A1W2PR95 340 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 H0YGN5 161 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 ZBTB43O43298 467 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 PSMA5P28066 241 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 HSD17B4P51659 736 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 GHRHRQ02643 423 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 APOBRQ0VD83 1088 aa26.41■■□□□ 1.82
IRF3-220ENST00000598108 PWP2Q15269 919 aaKnown RBP26.41■■□□□ 1.82
IRF3-220ENST00000598108 FAM217BQ9NTX9 383 aaPredicted RBP26.41■■□□□ 1.82
IRF3-220ENST00000598108 SYNRGQ9UMZ2 1314 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 MYADML2A6NDP7 307 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 KBTBD13C9JR72 458 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 FGD1P98174 961 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 TNFAIP2Q03169 654 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 LRRC26Q2I0M4 334 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 BRF1Q92994 677 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 ZSWIM6Q9HCJ5 1215 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 VTA1Q9NP79 307 aa26.4■■□□□ 1.82
IRF3-220ENST00000598108 LCTP09848 1927 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 EVI5O60447 810 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 SMPD1P17405 629 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 HOXA13P31271 388 aaPredicted RBP26.39■■□□□ 1.82
IRF3-220ENST00000598108 TRAF1Q13077 416 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 RTN1Q16799 776 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 RNF180Q86T96 592 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 FBXL16Q8N461 479 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 KLHDC9Q8NEP7 349 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 FERMT2Q96AC1 680 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 RMDN3Q96TC7 470 aa26.39■■□□□ 1.82
IRF3-220ENST00000598108 GNEQ9Y223 722 aaKnown RBP26.39■■□□□ 1.82
IRF3-220ENST00000598108 CDC27P30260 824 aa26.38■■□□□ 1.81
IRF3-220ENST00000598108 ATN1P54259 1190 aaPredicted RBP26.38■■□□□ 1.81
IRF3-220ENST00000598108 PDE4DQ08499 809 aa26.38■■□□□ 1.81
IRF3-220ENST00000598108 FUT2Q10981 343 aa26.38■■□□□ 1.81
IRF3-220ENST00000598108 IQSEC1Q6DN90 963 aa26.38■■□□□ 1.81
IRF3-220ENST00000598108 CCSAPQ6IQ19 270 aaPredicted RBP26.38■■□□□ 1.81
IRF3-220ENST00000598108 NOL8Q76FK4 1167 aaKnown RBP26.38■■□□□ 1.81
IRF3-220ENST00000598108 NSUN6Q8TEA1 469 aaKnown RBP26.38■■□□□ 1.81
IRF3-220ENST00000598108 AGXT2Q9BYV1 514 aa26.38■■□□□ 1.81
IRF3-220ENST00000598108 NAP1L2Q9ULW6 460 aaPredicted RBP26.38■■□□□ 1.81
IRF3-220ENST00000598108 MCM3APO60318 1980 aa26.38■■□□□ 1.81
IRF3-220ENST00000598108 GOLGA8AA7E2F4 631 aa26.37■■□□□ 1.81
IRF3-220ENST00000598108 GOLGA8BA8MQT2 603 aa26.37■■□□□ 1.81
IRF3-220ENST00000598108 CTAGE5O15320 804 aa26.37■■□□□ 1.81
IRF3-220ENST00000598108 SEC24BO95487 1268 aa26.37■■□□□ 1.81
IRF3-220ENST00000598108 GJA9P57773 515 aa26.37■■□□□ 1.81
IRF3-220ENST00000598108 RUFY3Q7L099 469 aa26.37■■□□□ 1.81
IRF3-220ENST00000598108 UPF3AQ9H1J1 476 aaKnown RBP26.37■■□□□ 1.81
IRF3-220ENST00000598108 RBM28Q9NW13 759 aaKnown RBP26.37■■□□□ 1.81
IRF3-220ENST00000598108 SEC63Q9UGP8 760 aaKnown RBP26.37■■□□□ 1.81
IRF3-220ENST00000598108 PHF24Q9UPV7 400 aa26.37■■□□□ 1.81
IRF3-220ENST00000598108 RBM47A0AV96 593 aaKnown RBP26.36■■□□□ 1.81
IRF3-220ENST00000598108 C7orf61Q8IZ16 206 aa26.36■■□□□ 1.81
IRF3-220ENST00000598108 UPF3BQ9BZI7 483 aaKnown RBP26.36■■□□□ 1.81
IRF3-220ENST00000598108 TM6SF1Q9BZW5 370 aa26.36■■□□□ 1.81
IRF3-220ENST00000598108 PXMP2Q9NR77 195 aa26.36■■□□□ 1.81
IRF3-220ENST00000598108 MAP3K20Q9NYL2 800 aaKnown RBP26.36■■□□□ 1.81
IRF3-220ENST00000598108 NR2E3Q9Y5X4 410 aa26.36■■□□□ 1.81
IRF3-220ENST00000598108 FRMPD3Q5JV73 1810 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms