RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 KPNA6O60684 536 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 FGAP02671 866 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 PBX2P40425 430 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 RRP12Q5JTH9 1297 aaKnown RBP20.01■□□□□ 0.79
PNKP-210ENST00000597965 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 DNERQ8NFT8 737 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 ATXN2LQ8WWM7 1075 aaKnown RBP20.01■□□□□ 0.79
PNKP-210ENST00000597965 TMEM47Q9BQJ4 181 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 NOC4LQ9BVI4 516 aaKnown RBP20.01■□□□□ 0.79
PNKP-210ENST00000597965 MAF1Q9H063 256 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 RNF41Q9H4P4 317 aaPredicted RBP20.01■□□□□ 0.79
PNKP-210ENST00000597965 INCENPQ9NQS7 918 aa20.01■□□□□ 0.79
PNKP-210ENST00000597965 GRXCR1A8MXD5 290 aa20■□□□□ 0.79
PNKP-210ENST00000597965 SLC16A2P36021 539 aa20■□□□□ 0.79
PNKP-210ENST00000597965 PDE1AP54750 535 aa20■□□□□ 0.79
PNKP-210ENST00000597965 PDE4DQ08499 809 aa20■□□□□ 0.79
PNKP-210ENST00000597965 RNF207Q6ZRF8 634 aa20■□□□□ 0.79
PNKP-210ENST00000597965 MFSD6Q6ZSS7 791 aa20■□□□□ 0.79
PNKP-210ENST00000597965 OTOP2Q7RTS6 562 aa20■□□□□ 0.79
PNKP-210ENST00000597965 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
PNKP-210ENST00000597965 TRPV6Q9H1D0 765 aa20■□□□□ 0.79
PNKP-210ENST00000597965 ALDH8A1Q9H2A2 487 aaPredicted RBP20■□□□□ 0.79
PNKP-210ENST00000597965 TSPYL2Q9H2G4 693 aaPredicted RBP20■□□□□ 0.79
PNKP-210ENST00000597965 SLC4A7Q9Y6M7 1214 aa20■□□□□ 0.79
PNKP-210ENST00000597965 GRIN2DO15399 1336 aa20■□□□□ 0.79
PNKP-210ENST00000597965 MYO9BQ13459 2157 aa20■□□□□ 0.79
PNKP-210ENST00000597965 PDHBP11177 359 aa19.99■□□□□ 0.79
PNKP-210ENST00000597965 CCL23P55773 120 aa19.99■□□□□ 0.79
PNKP-210ENST00000597965 GPATCH4Q5T3I0 446 aaKnown RBP19.99■□□□□ 0.79
PNKP-210ENST00000597965 MTG1Q9BT17 334 aaPredicted RBP19.99■□□□□ 0.79
PNKP-210ENST00000597965 PRDM12Q9H4Q4 367 aa19.99■□□□□ 0.79
PNKP-210ENST00000597965 PRDM6Q9NQX0 595 aa19.99■□□□□ 0.79
PNKP-210ENST00000597965 WDR19Q8NEZ3 1342 aa19.99■□□□□ 0.79
PNKP-210ENST00000597965 RBM47A0AV96 593 aaKnown RBP19.98■□□□□ 0.79
PNKP-210ENST00000597965 NFIBO00712 420 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 HSPD1P10809 573 aaKnown RBP19.98■□□□□ 0.79
PNKP-210ENST00000597965 ACTN1P12814 892 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 CALML3P27482 149 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 PSMC6P62333 389 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 HDAC1Q13547 482 aaPredicted RBP19.98■□□□□ 0.79
PNKP-210ENST00000597965 PPP2R5BQ15173 497 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 CCDC178Q5BJE1 867 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 TTBK2Q6IQ55 1244 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 OR6J1Q8NGC5 347 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 SCFD2Q8WU76 684 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 GPCPD1Q9NPB8 672 aa19.98■□□□□ 0.79
PNKP-210ENST00000597965 CXXC1Q9P0U4 656 aaPredicted RBP19.98■□□□□ 0.79
PNKP-210ENST00000597965 FRMPD2Q68DX3 1309 aaPredicted RBP19.98■□□□□ 0.79
PNKP-210ENST00000597965 RFC2P35250 354 aa19.97■□□□□ 0.79
PNKP-210ENST00000597965 PURAQ00577 322 aaKnown RBP19.97■□□□□ 0.79
PNKP-210ENST00000597965 AAMPQ13685 434 aa19.97■□□□□ 0.79
PNKP-210ENST00000597965 IL27Q8NEV9 243 aa19.97■□□□□ 0.79
PNKP-210ENST00000597965 ESR2Q92731 530 aa19.97■□□□□ 0.79
PNKP-210ENST00000597965 THEGQ9P2T0 379 aa19.97■□□□□ 0.79
PNKP-210ENST00000597965 PCDHA11Q9Y5I1 949 aa19.97■□□□□ 0.79
PNKP-210ENST00000597965 TNKSO95271 1327 aa19.97■□□□□ 0.79
PNKP-210ENST00000597965 LCTP09848 1927 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 MYL3P08590 195 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 IGFBP4P22692 258 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 RRP1P56182 461 aaKnown RBP19.96■□□□□ 0.79
PNKP-210ENST00000597965 PTPN11Q06124 597 aaPredicted RBP19.96■□□□□ 0.79
PNKP-210ENST00000597965 ZNF543Q08ER8 600 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 PPP2R2DQ66LE6 453 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 NFRKBQ6P4R8 1299 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 RASGRP2Q7LDG7 609 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 USP38Q8NB14 1042 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 RGS22Q8NE09 1264 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 FAM227BQ96M60 508 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 WNT8AQ9H1J5 351 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 NKX2-4Q9H2Z4 354 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 UMODL1Q5DID0 1318 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 CCDC171Q6TFL3 1326 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 TTC28Q96AY4 2481 aa19.96■□□□□ 0.79
PNKP-210ENST00000597965 A0A0D9SFI3 127 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 ZBBXA8MT70 800 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 TRIM6-TRIM34B2RNG4 842 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 TNFRSF10AO00220 468 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
PNKP-210ENST00000597965 SNHG28P0DPA3 235 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 ATP2A2P16615 1042 aaKnown RBP19.95■□□□□ 0.78
PNKP-210ENST00000597965 RPS6P62753 249 aaKnown RBP19.95■□□□□ 0.78
PNKP-210ENST00000597965 TTLL4Q14679 1199 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 IQCA1Q86XH1 822 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 DGKHQ86XP1 1220 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 RETREG2Q8NC44 543 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 CLEC4DQ8WXI8 215 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 PPM1EQ8WY54 764 aa19.95■□□□□ 0.78
PNKP-210ENST00000597965 PURBQ96QR8 312 aaKnown RBP19.95■□□□□ 0.78
PNKP-210ENST00000597965 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
PNKP-210ENST00000597965 SPTBN5Q9NRC6 3674 aaKnown RBP19.95■□□□□ 0.78
PNKP-210ENST00000597965 A6NJR5 290 aa19.94■□□□□ 0.78
PNKP-210ENST00000597965 PITPNM1O00562 1244 aa19.94■□□□□ 0.78
PNKP-210ENST00000597965 EDNRBP24530 442 aa19.94■□□□□ 0.78
PNKP-210ENST00000597965 MRPS5P82675 430 aaKnown RBP19.94■□□□□ 0.78
PNKP-210ENST00000597965 BFSP2Q13515 415 aa19.94■□□□□ 0.78
PNKP-210ENST00000597965 FAM47CQ5HY64 1035 aa19.94■□□□□ 0.78
PNKP-210ENST00000597965 SLC30A10Q6XR72 485 aa19.94■□□□□ 0.78
PNKP-210ENST00000597965 TRMT13Q9NUP7 481 aaKnown RBP19.94■□□□□ 0.78
PNKP-210ENST00000597965 ZNF213O14771 459 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 TXNP10599 105 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms