RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 NFRKBQ6P4R8 1299 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 CNKSR3Q6P9H4 555 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
IRF3-218ENST00000597369 SAMD11Q96NU1 681 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 C17orf80Q9BSJ5 609 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 NSUN3Q9H649 340 aaKnown RBP15.65■□□□□ 0.1
IRF3-218ENST00000597369 CLDND1Q9NY35 253 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 INSL6Q9Y581 213 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 MICAL3Q7RTP6 2002 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 CHD6Q8TD26 2715 aa15.65■□□□□ 0.1
IRF3-218ENST00000597369 H0Y858 1186 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 H3BNC9 293 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 EFCAB14O75071 495 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 IDH1O75874 414 aaKnown RBP15.64■□□□□ 0.09
IRF3-218ENST00000597369 PARNO95453 639 aaKnown RBP15.64■□□□□ 0.09
IRF3-218ENST00000597369 CXCL10P02778 98 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 PTGS1P23219 599 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 VCPP55072 806 aaKnown RBP15.64■□□□□ 0.09
IRF3-218ENST00000597369 CNTN2Q02246 1040 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 EP400NLQ6ZTU2 488 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 AFAP1L1Q8TED9 768 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 KANSL2Q9H9L4 492 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 TLR9Q9NR96 1032 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 CFAP47Q6ZTR5 3102 aa15.64■□□□□ 0.09
IRF3-218ENST00000597369 STXBP3O00186 592 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 ZBED4O75132 1171 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 SIGLEC14Q08ET2 396 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.09
IRF3-218ENST00000597369 NBPF20Q3BBV1 942 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 CPXCR1Q8N123 301 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 CAGE1Q8TC20 777 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 CRBNQ96SW2 442 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 DBNDD2Q9BQY9 259 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 MTG1Q9BT17 334 aaPredicted RBP15.63■□□□□ 0.09
IRF3-218ENST00000597369 PDGFCQ9NRA1 345 aa15.63■□□□□ 0.09
IRF3-218ENST00000597369 ATG2AQ2TAZ0 1938 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 SOWAHBA6NEL2 793 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 USP17L12C9JPN9 530 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 USP17L21D6R901 530 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 OAZ1P54368 228 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 SMAD4Q13485 552 aaKnown RBP15.62■□□□□ 0.09
IRF3-218ENST00000597369 DUSP28Q4G0W2 176 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 EPC2Q52LR7 807 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 TMEM63BQ5T3F8 832 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 RPAINQ86UA6 219 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 SP7Q8TDD2 431 aaPredicted RBP15.62■□□□□ 0.09
IRF3-218ENST00000597369 ASIC4Q96FT7 647 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 MEIS3Q99687 375 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 SLC38A10Q9HBR0 1119 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
IRF3-218ENST00000597369 NLRC5Q86WI3 1866 aa15.62■□□□□ 0.09
IRF3-218ENST00000597369 MED19A0JLT2 244 aaPredicted RBP15.61■□□□□ 0.09
IRF3-218ENST00000597369 SLC4A3P48751 1232 aa15.61■□□□□ 0.09
IRF3-218ENST00000597369 CPT1AP50416 773 aa15.61■□□□□ 0.09
IRF3-218ENST00000597369 HTRA4P83105 476 aaPredicted RBP15.61■□□□□ 0.09
IRF3-218ENST00000597369 TNNI3KQ59H18 835 aa15.61■□□□□ 0.09
IRF3-218ENST00000597369 CCDC155Q8N6L0 562 aa15.61■□□□□ 0.09
IRF3-218ENST00000597369 DYNLL2Q96FJ2 89 aa15.61■□□□□ 0.09
IRF3-218ENST00000597369 CRNKL1Q9BZJ0 848 aaKnown RBP15.61■□□□□ 0.09
IRF3-218ENST00000597369 RAVER2Q9HCJ3 691 aaKnown RBP15.61■□□□□ 0.09
IRF3-218ENST00000597369 DCP1AQ9NPI6 582 aaPredicted RBP15.61■□□□□ 0.09
IRF3-218ENST00000597369 FPGT-TNNI3KV9GXZ4 949 aa15.61■□□□□ 0.09
IRF3-218ENST00000597369 MAGEB6P1A0A0J9YX57 407 aa15.6■□□□□ 0.09
IRF3-218ENST00000597369 LOC730098B7Z3J9 87 aa15.6■□□□□ 0.09
IRF3-218ENST00000597369 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
IRF3-218ENST00000597369 DLX2Q07687 328 aaPredicted RBP15.6■□□□□ 0.09
IRF3-218ENST00000597369 GPM6BQ13491 265 aa15.6■□□□□ 0.09
IRF3-218ENST00000597369 IKBKEQ14164 716 aa15.6■□□□□ 0.09
IRF3-218ENST00000597369 CBX2Q14781 532 aaPredicted RBP15.6■□□□□ 0.09
IRF3-218ENST00000597369 FAM47CQ5HY64 1035 aa15.6■□□□□ 0.09
IRF3-218ENST00000597369 VTA1Q9NP79 307 aa15.6■□□□□ 0.09
IRF3-218ENST00000597369 GPHNQ9NQX3 736 aaPredicted RBP15.6■□□□□ 0.09
IRF3-218ENST00000597369 RALGAPA2Q2PPJ7 1873 aa15.6■□□□□ 0.09
IRF3-218ENST00000597369 MYL3P08590 195 aa15.59■□□□□ 0.09
IRF3-218ENST00000597369 CYP2D6P10635 497 aa15.59■□□□□ 0.09
IRF3-218ENST00000597369 SELPP16109 830 aa15.59■□□□□ 0.09
IRF3-218ENST00000597369 RBL2Q08999 1139 aa15.59■□□□□ 0.09
IRF3-218ENST00000597369 ALDH1L2Q3SY69 923 aa15.59■□□□□ 0.09
IRF3-218ENST00000597369 KIAA1211Q6ZU35 1233 aa15.59■□□□□ 0.09
IRF3-218ENST00000597369 NOD1Q9Y239 953 aa15.59■□□□□ 0.09
IRF3-218ENST00000597369 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
IRF3-218ENST00000597369 BAZ2AQ9UIF9 1905 aaKnown RBP15.58■□□□□ 0.09
IRF3-218ENST00000597369 ATRXP46100 2492 aa15.58■□□□□ 0.09
IRF3-218ENST00000597369 PKD1L2Q7Z442 2459 aa15.58■□□□□ 0.09
IRF3-218ENST00000597369 RAD21O60216 631 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 KPNA6O60684 536 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 NBNO60934 754 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 GNAI3P08754 354 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 CDK8P49336 464 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 CLUL1Q15846 466 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 TCTN1Q2MV58 587 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 FAM117BQ6P1L5 589 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 FBXO16Q8IX29 292 aaPredicted RBP15.58■□□□□ 0.08
IRF3-218ENST00000597369 MORC4Q8TE76 937 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 NUP88Q99567 741 aaPredicted RBP15.58■□□□□ 0.08
IRF3-218ENST00000597369 ACAD9Q9H845 621 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 A1CFQ9NQ94 594 aaKnown RBP15.58■□□□□ 0.08
IRF3-218ENST00000597369 COG6Q9Y2V7 657 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 CEP250Q9BV73 2442 aa15.58■□□□□ 0.08
IRF3-218ENST00000597369 GREB1LQ9C091 1923 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms