RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 SMIM24O75264 130 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 PCK1P35558 622 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 RFX5P48382 616 aaPredicted RBP17.05■□□□□ 0.32
PDE4C-211ENST00000597360 CCDC197Q8NCU1 140 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 MGARPQ8TDB4 240 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 ELAC2Q9BQ52 826 aaKnown RBP17.05■□□□□ 0.32
PDE4C-211ENST00000597360 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 LGALS16A8MUM7 142 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 KIF11P52732 1056 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
PDE4C-211ENST00000597360 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
PDE4C-211ENST00000597360 KIF3CO14782 793 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 SEMA3EO15041 775 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 WDR59Q6PJI9 974 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 RUFY4Q6ZNE9 571 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 CEP120Q8N960 986 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 CUL5Q93034 780 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 ATP6V0A4Q9HBG4 840 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 FMNL1O95466 1100 aaPredicted RBP17.04■□□□□ 0.32
PDE4C-211ENST00000597360 TNNC1P63316 161 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 KCNK3O14649 394 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 AP1M1Q9BXS5 423 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 CAPN11Q9UMQ6 739 aa17.04■□□□□ 0.32
PDE4C-211ENST00000597360 G3BP2Q9UN86 482 aaKnown RBP17.04■□□□□ 0.32
PDE4C-211ENST00000597360 ATP6V1G2O95670 118 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
PDE4C-211ENST00000597360 ZNF790Q6PG37 636 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 KIF2BQ8N4N8 673 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
PDE4C-211ENST00000597360 NCAPD2Q15021 1401 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 CAND2O75155 1236 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 KIF5BP33176 963 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 ASIC1P78348 528 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 ZBED6P86452 979 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 ADAT2Q7Z6V5 191 aaKnown RBP17.03■□□□□ 0.32
PDE4C-211ENST00000597360 JCADQ9P266 1359 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 GFPT1Q06210 699 aaPredicted RBP17.03■□□□□ 0.32
PDE4C-211ENST00000597360 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
PDE4C-211ENST00000597360 MIGA1Q8NAN2 632 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 HELBQ8NG08 1087 aaPredicted RBP17.03■□□□□ 0.32
PDE4C-211ENST00000597360 PPP1R12CQ9BZL4 782 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 ARMT1Q9H993 441 aa17.03■□□□□ 0.32
PDE4C-211ENST00000597360 ZNF532Q9HCE3 1301 aa17.02■□□□□ 0.32
PDE4C-211ENST00000597360 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
PDE4C-211ENST00000597360 FAM237AA0A1B0GTK4 181 aa17.02■□□□□ 0.32
PDE4C-211ENST00000597360 PDHA1P08559 390 aa17.02■□□□□ 0.32
PDE4C-211ENST00000597360 CASKIN2Q8WXE0 1202 aa17.02■□□□□ 0.32
PDE4C-211ENST00000597360 RAPGEF5Q92565 580 aa17.02■□□□□ 0.32
PDE4C-211ENST00000597360 CNOT6LQ96LI5 555 aaKnown RBP17.02■□□□□ 0.32
PDE4C-211ENST00000597360 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.32
PDE4C-211ENST00000597360 AATFQ9NY61 560 aaKnown RBP eCLIP17.02■□□□□ 0.32
PDE4C-211ENST00000597360 GTPBP6O43824 516 aaPredicted RBP17.02■□□□□ 0.31
PDE4C-211ENST00000597360 MRPL12P52815 198 aaKnown RBP17.02■□□□□ 0.31
PDE4C-211ENST00000597360 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.31
PDE4C-211ENST00000597360 NOP53Q9NZM5 478 aaKnown RBP17.02■□□□□ 0.31
PDE4C-211ENST00000597360 SLAIN2Q9P270 581 aa17.02■□□□□ 0.31
PDE4C-211ENST00000597360 PALLDQ8WX93 1383 aa17.02■□□□□ 0.31
PDE4C-211ENST00000597360 BAZ2BQ9UIF8 2168 aaKnown RBP17.02■□□□□ 0.31
PDE4C-211ENST00000597360 EVI5O60447 810 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 MBD4O95243 580 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 IFNAR1P17181 557 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 MXRA7P84157 204 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 SLC4A8Q2Y0W8 1093 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 FAM228AQ86W67 206 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 LRRC45Q96CN5 670 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 LY9Q9HBG7 655 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 TRPC6Q9Y210 931 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 IRF6O14896 467 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 TATP17735 454 aaPredicted RBP17.01■□□□□ 0.31
PDE4C-211ENST00000597360 PMS1P54277 932 aaKnown RBP17.01■□□□□ 0.31
PDE4C-211ENST00000597360 PDE4DQ08499 809 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 PLCB4Q15147 1175 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 WLSQ5T9L3 541 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 ZNF483Q8TF39 744 aaPredicted RBP17.01■□□□□ 0.31
PDE4C-211ENST00000597360 ARID4AP29374 1257 aaPredicted RBP17.01■□□□□ 0.31
PDE4C-211ENST00000597360 TAF11Q15544 211 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 BRINP3Q76B58 766 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 ZNF579Q8NAF0 562 aaKnown RBP17.01■□□□□ 0.31
PDE4C-211ENST00000597360 GOLPH3Q9H4A6 298 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
PDE4C-211ENST00000597360 MYH8P13535 1937 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 TRIM37O94972 964 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 PPP2R2AP63151 447 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 EARS2Q5JPH6 523 aaKnown RBP17■□□□□ 0.31
PDE4C-211ENST00000597360 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 NUP58Q9BVL2 599 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 LUC7LQ9NQ29 371 aaKnown RBP17■□□□□ 0.31
PDE4C-211ENST00000597360 XDHP47989 1333 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 PEAK1Q9H792 1746 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 EPB41P11171 864 aaKnown RBP17■□□□□ 0.31
PDE4C-211ENST00000597360 ELF3P78545 371 aaPredicted RBP17■□□□□ 0.31
PDE4C-211ENST00000597360 DRP2Q13474 957 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 TCIRG1Q13488 830 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 NTRK3Q16288 839 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 LDHAL6AQ6ZMR3 332 aa17■□□□□ 0.31
PDE4C-211ENST00000597360 YTHDF3Q7Z739 585 aaKnown RBP17■□□□□ 0.31
PDE4C-211ENST00000597360 FANCBQ8NB91 859 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms