RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 LSG1Q9H089 658 aaKnown RBP15.25■□□□□ 0.03
LIG1-212ENST00000596549 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 COL20A1Q9P218 1284 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 ADD3Q9UEY8 706 aaKnown RBP15.25■□□□□ 0.03
LIG1-212ENST00000596549 PRKAG2Q9UGJ0 569 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 MAD2L2Q9UI95 211 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 PNMA2Q9UL42 364 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 GBF1Q92538 1859 aa15.25■□□□□ 0.03
LIG1-212ENST00000596549 ABCB11O95342 1321 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 BAZ2BQ9UIF8 2168 aaKnown RBP15.24■□□□□ 0.03
LIG1-212ENST00000596549 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 OPLAHO14841 1288 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 PPP1R11O60927 126 aaPredicted RBP15.24■□□□□ 0.03
LIG1-212ENST00000596549 TRDNQ13061 729 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
LIG1-212ENST00000596549 CHST3Q7LGC8 479 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 ANKRD33Q7Z3H0 272 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 PCSK9Q8NBP7 692 aaKnown RBP15.24■□□□□ 0.03
LIG1-212ENST00000596549 NCOA7Q8NI08 942 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 NUP133Q8WUM0 1156 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 TBC1D5Q92609 795 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 BADQ92934 168 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 MTMR8Q96EF0 704 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 LBHD1Q9BQE6 289 aaPredicted RBP15.24■□□□□ 0.03
LIG1-212ENST00000596549 ESYT1Q9BSJ8 1104 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 DOCK5Q9H7D0 1870 aa15.24■□□□□ 0.03
LIG1-212ENST00000596549 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
LIG1-212ENST00000596549 ELP1O95163 1332 aa15.23■□□□□ 0.03
LIG1-212ENST00000596549 PALM3A6NDB9 673 aaPredicted RBP15.23■□□□□ 0.03
LIG1-212ENST00000596549 FAAP100Q0VG06 881 aa15.23■□□□□ 0.03
LIG1-212ENST00000596549 GRM4Q14833 912 aa15.23■□□□□ 0.03
LIG1-212ENST00000596549 GNASQ5JWF2 1037 aa15.23■□□□□ 0.03
LIG1-212ENST00000596549 RALYLQ86SE5 291 aaKnown RBP15.23■□□□□ 0.03
LIG1-212ENST00000596549 GLT1D1Q96MS3 346 aa15.23■□□□□ 0.03
LIG1-212ENST00000596549 SPC25Q9HBM1 224 aa15.23■□□□□ 0.03
LIG1-212ENST00000596549 RBM47A0AV96 593 aaKnown RBP15.22■□□□□ 0.03
LIG1-212ENST00000596549 IFIT3O14879 490 aaKnown RBP15.22■□□□□ 0.03
LIG1-212ENST00000596549 KIAA0355O15063 1070 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 DHX16O60231 1041 aaKnown RBP15.22■□□□□ 0.03
LIG1-212ENST00000596549 CDK7P50613 346 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 TROAPQ12815 778 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 FSCN1Q16658 493 aaKnown RBP15.22■□□□□ 0.03
LIG1-212ENST00000596549 DUSP28Q4G0W2 176 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 BMP2KLQ5H9B9 411 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 IQSEC1Q6DN90 963 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 CXCL17Q6UXB2 119 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 KIAA1211Q6ZU35 1233 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
LIG1-212ENST00000596549 FBXO11Q86XK2 927 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 FAM126BQ8IXS8 530 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 TOX2Q96NM4 488 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 VAT1LQ9HCJ6 419 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 TBX21Q9UL17 535 aa15.22■□□□□ 0.03
LIG1-212ENST00000596549 A0A0U1RQG5 324 aaPredicted RBP15.21■□□□□ 0.03
LIG1-212ENST00000596549 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
LIG1-212ENST00000596549 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
LIG1-212ENST00000596549 CYTH3O43739 400 aa15.21■□□□□ 0.03
LIG1-212ENST00000596549 EPHB4P54760 987 aa15.21■□□□□ 0.03
LIG1-212ENST00000596549 WTAPQ15007 396 aa15.21■□□□□ 0.03
LIG1-212ENST00000596549 RGS22Q8NE09 1264 aa15.21■□□□□ 0.03
LIG1-212ENST00000596549 SYTL5Q8TDW5 730 aaPredicted RBP15.21■□□□□ 0.03
LIG1-212ENST00000596549 IGDCC4Q8TDY8 1250 aa15.21■□□□□ 0.03
LIG1-212ENST00000596549 GPHNQ9NQX3 736 aaPredicted RBP15.21■□□□□ 0.03
LIG1-212ENST00000596549 Q9Y3F1 56 aa15.21■□□□□ 0.03
LIG1-212ENST00000596549 SCN5AQ14524 2016 aa15.21■□□□□ 0.02
LIG1-212ENST00000596549 GRIN2DO15399 1336 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 MROH7Q68CQ1 1323 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 ARVCFO00192 962 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 SLC27A2O14975 620 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 ARIH2O95376 493 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 GHRHRQ02643 423 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 PDE4DQ08499 809 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 SHHQ15465 462 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 SLC43A3Q8NBI5 491 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 WDR11Q9BZH6 1224 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
LIG1-212ENST00000596549 ERICH2A1L162 156 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 ZBTB5O15062 677 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 HSD17B4P51659 736 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 NECTIN1Q15223 517 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 TMEM67Q5HYA8 995 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 HOMER1Q86YM7 354 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 COPS5Q92905 334 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 PIGSQ96S52 555 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 MYL10Q9BUA6 226 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 AMNQ9BXJ7 453 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 AP5M1Q9H0R1 490 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 TMEM39AQ9NV64 488 aa15.19■□□□□ 0.02
LIG1-212ENST00000596549 LAMA2P24043 3122 aaKnown RBP15.19■□□□□ 0.02
LIG1-212ENST00000596549 DCDC2CA8MYV0 355 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 CD4P01730 458 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 RAG1P15918 1043 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 PSMC6P62333 389 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 SART3Q15020 963 aaKnown RBP15.18■□□□□ 0.02
LIG1-212ENST00000596549 PPP2R5BQ15173 497 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 CREB3L3Q68CJ9 461 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms