RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 PFKFB2O60825 505 aa26.44■■□□□ 1.82
PNKP-205ENST00000595081 CACNB2Q08289 660 aaPredicted RBP26.44■■□□□ 1.82
PNKP-205ENST00000595081 ME3Q16798 604 aa26.44■■□□□ 1.82
PNKP-205ENST00000595081 MAP3K21Q5TCX8 1036 aa26.44■■□□□ 1.82
PNKP-205ENST00000595081 MCF2L2Q86YR7 1114 aa26.44■■□□□ 1.82
PNKP-205ENST00000595081 TINF2Q9BSI4 451 aa26.44■■□□□ 1.82
PNKP-205ENST00000595081 UNC93B1Q9H1C4 597 aa26.44■■□□□ 1.82
PNKP-205ENST00000595081 DDX49Q9Y6V7 483 aaKnown RBP26.44■■□□□ 1.82
PNKP-205ENST00000595081 CFBP00751 764 aa26.43■■□□□ 1.82
PNKP-205ENST00000595081 CCL5P13501 91 aa26.43■■□□□ 1.82
PNKP-205ENST00000595081 IFNAR1P17181 557 aa26.43■■□□□ 1.82
PNKP-205ENST00000595081 WWC2Q6AWC2 1192 aa26.43■■□□□ 1.82
PNKP-205ENST00000595081 NECAB1Q8N987 351 aa26.43■■□□□ 1.82
PNKP-205ENST00000595081 SLC26A6Q9BXS9 759 aa26.43■■□□□ 1.82
PNKP-205ENST00000595081 COL20A1Q9P218 1284 aa26.43■■□□□ 1.82
PNKP-205ENST00000595081 LCTP09848 1927 aa26.42■■□□□ 1.82
PNKP-205ENST00000595081 CPLX1O14810 134 aa26.42■■□□□ 1.82
PNKP-205ENST00000595081 ZNF467Q7Z7K2 595 aaPredicted RBP26.42■■□□□ 1.82
PNKP-205ENST00000595081 SYTL5Q8TDW5 730 aaPredicted RBP26.42■■□□□ 1.82
PNKP-205ENST00000595081 RBBP6Q7Z6E9 1792 aaKnown RBP26.41■■□□□ 1.82
PNKP-205ENST00000595081 PRPF3O43395 683 aaKnown RBP26.41■■□□□ 1.82
PNKP-205ENST00000595081 DTNBO60941 627 aa26.41■■□□□ 1.82
PNKP-205ENST00000595081 HOXA13P31271 388 aaPredicted RBP26.41■■□□□ 1.82
PNKP-205ENST00000595081 PRAMEF19Q5SWL8 479 aa26.41■■□□□ 1.82
PNKP-205ENST00000595081 CCND3P30281 292 aaPredicted RBP26.4■■□□□ 1.82
PNKP-205ENST00000595081 HSD17B4P51659 736 aa26.4■■□□□ 1.82
PNKP-205ENST00000595081 PKN1Q16512 942 aa26.4■■□□□ 1.82
PNKP-205ENST00000595081 PFKFB3Q16875 520 aaPredicted RBP26.4■■□□□ 1.82
PNKP-205ENST00000595081 TYW1BQ6NUM6 668 aa26.4■■□□□ 1.82
PNKP-205ENST00000595081 MAMDC4Q6UXC1 1216 aa26.4■■□□□ 1.82
PNKP-205ENST00000595081 TRPV1Q8NER1 839 aa26.4■■□□□ 1.82
PNKP-205ENST00000595081 RNF26Q9BY78 433 aaPredicted RBP26.4■■□□□ 1.82
PNKP-205ENST00000595081 RNF208Q9H0X6 261 aa26.4■■□□□ 1.82
PNKP-205ENST00000595081 LIMCH1Q9UPQ0 1083 aa26.4■■□□□ 1.82
PNKP-205ENST00000595081 SNAI1O95863 264 aaPredicted RBP26.39■■□□□ 1.82
PNKP-205ENST00000595081 SCG2P13521 617 aa26.39■■□□□ 1.82
PNKP-205ENST00000595081 AKAP17AQ02040 695 aaKnown RBP26.39■■□□□ 1.82
PNKP-205ENST00000595081 GHRHRQ02643 423 aa26.39■■□□□ 1.82
PNKP-205ENST00000595081 CPLX2Q6PUV4 134 aaKnown RBP26.39■■□□□ 1.82
PNKP-205ENST00000595081 ARMCX2Q7L311 632 aa26.39■■□□□ 1.82
PNKP-205ENST00000595081 MSL3Q8N5Y2 521 aaKnown RBP26.39■■□□□ 1.82
PNKP-205ENST00000595081 GTF3C6Q969F1 213 aa26.39■■□□□ 1.82
PNKP-205ENST00000595081 MAF1Q9H063 256 aa26.39■■□□□ 1.82
PNKP-205ENST00000595081 HMX1Q9NP08 348 aaPredicted RBP26.39■■□□□ 1.82
PNKP-205ENST00000595081 ADD3Q9UEY8 706 aaKnown RBP26.39■■□□□ 1.82
PNKP-205ENST00000595081 BRCA2P51587 3418 aa26.39■■□□□ 1.81
PNKP-205ENST00000595081 RPTORQ8N122 1335 aa26.39■■□□□ 1.81
PNKP-205ENST00000595081 SYNGAP1Q96PV0 1343 aa26.39■■□□□ 1.81
PNKP-205ENST00000595081 GCOM1H8Y6P7 765 aaPredicted RBP26.38■■□□□ 1.81
PNKP-205ENST00000595081 STXBP3O00186 592 aa26.38■■□□□ 1.81
PNKP-205ENST00000595081 POLR2MP0CAP2 368 aa26.38■■□□□ 1.81
PNKP-205ENST00000595081 CYBAP13498 195 aa26.38■■□□□ 1.81
PNKP-205ENST00000595081 ALDH5A1P51649 535 aaPredicted RBP26.38■■□□□ 1.81
PNKP-205ENST00000595081 NAPAP54920 295 aa26.38■■□□□ 1.81
PNKP-205ENST00000595081 TAAR1Q96RJ0 339 aa26.38■■□□□ 1.81
PNKP-205ENST00000595081 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.38■■□□□ 1.81
PNKP-205ENST00000595081 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.38■■□□□ 1.81
PNKP-205ENST00000595081 BARHL2Q9NY43 387 aa26.38■■□□□ 1.81
PNKP-205ENST00000595081 RBM27Q9P2N5 1060 aaKnown RBP26.38■■□□□ 1.81
PNKP-205ENST00000595081 ST18O60284 1047 aa26.37■■□□□ 1.81
PNKP-205ENST00000595081 CTDNEP1O95476 244 aa26.37■■□□□ 1.81
PNKP-205ENST00000595081 SSRP1Q08945 709 aaKnown RBP26.37■■□□□ 1.81
PNKP-205ENST00000595081 ST3GAL1Q11201 340 aa26.37■■□□□ 1.81
PNKP-205ENST00000595081 TRIM22Q8IYM9 498 aa26.37■■□□□ 1.81
PNKP-205ENST00000595081 ASB14A6NK59 587 aa26.36■■□□□ 1.81
PNKP-205ENST00000595081 CD2BP2O95400 341 aaKnown RBP26.36■■□□□ 1.81
PNKP-205ENST00000595081 SOX10P56693 466 aa26.36■■□□□ 1.81
PNKP-205ENST00000595081 USP17L6PQ6QN14 398 aa26.36■■□□□ 1.81
PNKP-205ENST00000595081 FCHSD1Q86WN1 690 aa26.36■■□□□ 1.81
PNKP-205ENST00000595081 TMEM106CQ9BVX2 250 aa26.36■■□□□ 1.81
PNKP-205ENST00000595081 PSTPIP2Q9H939 334 aa26.36■■□□□ 1.81
PNKP-205ENST00000595081 PAK6Q9NQU5 681 aaPredicted RBP26.36■■□□□ 1.81
PNKP-205ENST00000595081 CNPY2Q9Y2B0 182 aa26.36■■□□□ 1.81
PNKP-205ENST00000595081 MCM3APO60318 1980 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 POTEFA5A3E0 1075 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 hCG_1984214I3L0E3 225 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 CDKL5O76039 1030 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 CNGA1P29973 690 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 PPP1R18Q6NYC8 613 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 SAMD3Q8N6K7 520 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 ZNF713Q8N859 430 aaPredicted RBP26.35■■□□□ 1.81
PNKP-205ENST00000595081 DNERQ8NFT8 737 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 DEFB118Q96PH6 123 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 RMDN3Q96TC7 470 aa26.35■■□□□ 1.81
PNKP-205ENST00000595081 MAP3K20Q9NYL2 800 aaKnown RBP26.35■■□□□ 1.81
PNKP-205ENST00000595081 ZHX1Q9UKY1 873 aaPredicted RBP26.35■■□□□ 1.81
PNKP-205ENST00000595081 MEIS2O14770 477 aa26.34■■□□□ 1.81
PNKP-205ENST00000595081 CAPN15O75808 1086 aa26.34■■□□□ 1.81
PNKP-205ENST00000595081 UBE2SQ16763 222 aa26.34■■□□□ 1.81
PNKP-205ENST00000595081 CUL5Q93034 780 aa26.34■■□□□ 1.81
PNKP-205ENST00000595081 KIAA0100Q14667 2235 aaKnown RBP26.33■■□□□ 1.81
PNKP-205ENST00000595081 GJB1P08034 283 aa26.33■■□□□ 1.81
PNKP-205ENST00000595081 ZNF865P0CJ78 1059 aaPredicted RBP26.33■■□□□ 1.81
PNKP-205ENST00000595081 EIF2AK2P19525 551 aaKnown RBP26.33■■□□□ 1.81
PNKP-205ENST00000595081 ARHGEF16Q5VV41 709 aa26.33■■□□□ 1.81
PNKP-205ENST00000595081 EEPD1Q7L9B9 569 aa26.33■■□□□ 1.81
PNKP-205ENST00000595081 CCDC83Q8IWF9 413 aa26.33■■□□□ 1.81
PNKP-205ENST00000595081 SMARCC2Q8TAQ2 1214 aa26.33■■□□□ 1.81
PNKP-205ENST00000595081 MORC4Q8TE76 937 aa26.33■■□□□ 1.81
PNKP-205ENST00000595081 NSUN6Q8TEA1 469 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms