RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 JMJD4Q9H9V9 463 aa19.17■□□□□ 0.66
SHKBP1-205ENST00000594973 GYS2P54840 703 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 PDXDC2PQ6P474 469 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 ZBTB9Q96C00 473 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 PRMT6Q96LA8 375 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 CCDC17Q96LX7 622 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 MTRQ99707 1265 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 LMAN1P49257 510 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 CC2D2BQ6DHV5 1058 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 TRIM65Q6PJ69 517 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 NEK8Q86SG6 692 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 SUPT20HQ8NEM7 779 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 MED15Q96RN5 788 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 PLIN2Q99541 437 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 FUT8Q9BYC5 575 aa19.16■□□□□ 0.66
SHKBP1-205ENST00000594973 GDF11O95390 407 aa19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 EEF2P13639 858 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 STAT6P42226 847 aa19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 CUL4BQ13620 913 aa19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 MSL3Q8N5Y2 521 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 TTLL6Q8N841 843 aa19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 GSDMAQ96QA5 445 aa19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 CARD6Q9BX69 1037 aa19.15■□□□□ 0.66
SHKBP1-205ENST00000594973 RAD17O75943 681 aa19.14■□□□□ 0.66
SHKBP1-205ENST00000594973 CD44P16070 742 aaKnown RBP19.14■□□□□ 0.66
SHKBP1-205ENST00000594973 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.66
SHKBP1-205ENST00000594973 FBXO41Q8TF61 875 aa19.14■□□□□ 0.66
SHKBP1-205ENST00000594973 USP17L10C9JJH3 530 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 PPP1R11O60927 126 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 URI1O94763 535 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 UBA7P41226 1012 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 PSEN1P49768 467 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 ADCY7P51828 1080 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 STX17P56962 302 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 SEPT2Q15019 361 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 FCHSD1Q86WN1 690 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 ENOX1Q8TC92 643 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 PYM1Q9BRP8 204 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 TMX1Q9H3N1 280 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 DISC1Q9NRI5 854 aa19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 ZNF277Q9NRM2 450 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 SAMSN1Q9NSI8 373 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-205ENST00000594973 PNMA6FA0A0J9YX94 578 aa19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 GPATCH4Q5T3I0 446 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 ESYT2A0FGR8 921 aa19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 TMEM232C9JQI7 657 aa19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 hCG_1984214I3L0E3 225 aa19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 CBFA2T2O43439 604 aa19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 OR52Z1P0C646 297 aa19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 ZNF713Q8N859 430 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
SHKBP1-205ENST00000594973 LAD1O00515 517 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 SLC1A4P43007 532 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 UBE2SQ16763 222 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 RRAGBQ5VZM2 374 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 RSRC2Q7L4I2 434 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 LARGE2Q8N3Y3 721 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 PPM1EQ8WY54 764 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 KANSL2Q9H9L4 492 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 MAP2K7O14733 419 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 COBLO75128 1261 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 DPEP1P16444 411 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 ERCC5P28715 1186 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 BAG6P46379 1132 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 ICA1Q05084 483 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
SHKBP1-205ENST00000594973 LOC102724159A0A0B4J2E5 919 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 CLRN2A0PK11 232 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 TCP10L2B9ZVM9 353 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 GTPBP6O43824 516 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 ZNF18P17022 549 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 PRPHP41219 470 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 TECP42680 631 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 BRD3Q15059 726 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 PWP2Q15269 919 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 TATDN1Q6P1N9 297 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 CSRNP1Q96S65 589 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 ZBTB12Q9Y330 459 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 CCDC151A5D8V7 595 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 CLGNO14967 610 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 ZBTB5O15062 677 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 TNNI2P48788 182 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 ABCB5Q2M3G0 1257 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 NAALADL2Q58DX5 795 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 SLFN13Q68D06 897 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 SUGP1Q8IWZ8 645 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 INTS13Q9NVM9 706 aa19.11■□□□□ 0.65
SHKBP1-205ENST00000594973 SYNRGQ9UMZ2 1314 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 C10orf71Q711Q0 1435 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 PPP1R3GB7ZBB8 358 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 PSMD14O00487 310 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 ZSCAN12O43309 604 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 MYO1BO43795 1136 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 MAP3K9P80192 1104 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 PACS2Q86VP3 889 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 SIAH1Q8IUQ4 282 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 RTKN2Q8IZC4 609 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 DEF6Q9H4E7 631 aa19.1■□□□□ 0.65
SHKBP1-205ENST00000594973 RSBN1LQ6PCB5 846 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms