RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 COL24A1Q17RW2 1714 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 GOLGA6BA6NDN3 693 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 PJA2O43164 708 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 FGFR1OPO95684 399 aaKnown RBP14.75□□□□□ -0.05
VRK3-209ENST00000594948 OR52Z1P0C646 297 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 GGCXP38435 758 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 DNAJC21Q5F1R6 531 aaKnown RBP14.75□□□□□ -0.05
VRK3-209ENST00000594948 CENPPQ6IPU0 288 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 FOXR1Q6PIV2 292 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 EFCAB13Q8IY85 973 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 GPKOWQ92917 476 aaPredicted RBP eCLIP14.75□□□□□ -0.05
VRK3-209ENST00000594948 SH3GL2Q99962 352 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 CDCA7Q9BWT1 371 aaPredicted RBP14.75□□□□□ -0.05
VRK3-209ENST00000594948 JADE2Q9NQC1 790 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 MAD2L2Q9UI95 211 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 SBF2Q86WG5 1849 aa14.75□□□□□ -0.05
VRK3-209ENST00000594948 TNRC6CQ9HCJ0 1690 aaKnown RBP14.74□□□□□ -0.05
VRK3-209ENST00000594948 PP2D1A8MPX8 630 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 OPA1O60313 960 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 EPB41P11171 864 aaKnown RBP14.74□□□□□ -0.05
VRK3-209ENST00000594948 PLCG1P19174 1290 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 ATP6V1AP38606 617 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 PPFIA1Q13136 1202 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 NNTQ13423 1086 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 INF2Q27J81 1249 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 SLC10A5Q5PT55 438 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 TYW1BQ6NUM6 668 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 TFR2Q9UP52 801 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 SIK3Q9Y2K2 1263 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 HYOU1Q9Y4L1 999 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 PCDHA13Q9Y5I0 950 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 KIF13BQ9NQT8 1826 aa14.74□□□□□ -0.05
VRK3-209ENST00000594948 ZNF263O14978 683 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 CYP2D6P10635 497 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 NOP2P46087 812 aaKnown RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 EPHB4P54760 987 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 TFAP4Q01664 338 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 C2orf54Q08AI8 447 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 GLE1Q53GS7 698 aaKnown RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 C12orf60Q5U649 245 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 ALS2CLQ60I27 953 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 SPTY2D1Q68D10 685 aaPredicted RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 EMBQ6PCB8 327 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 CCDC84Q86UT8 332 aaPredicted RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 RASGRP4Q8TDF6 673 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 LRRC15Q8TF66 581 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 CAVIN3Q969G5 261 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 PCMTD1Q96MG8 357 aaPredicted RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 ALS2CR12Q96Q35 445 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 ZMYND12Q9H0C1 365 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 IL17RBQ9NRM6 502 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 RNF14Q9UBS8 474 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 LRWD1Q9UFC0 647 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 TSKSQ9UJT2 592 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 LOC102724428A0A0B4J2F2 783 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 PVALEFA0A1B0GWK0 134 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 PALM3A6NDB9 673 aaPredicted RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 GOLGA6CA6NDK9 693 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 ZNF185O15231 689 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 GOLGA6DP0CG33 693 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 MYBL2P10244 700 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 KLK7P49862 253 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 SIK1P57059 783 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 ASIC1P78348 528 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 MAN2A1Q16706 1144 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 TTC31Q49AM3 519 aaPredicted RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 VWA3BQ502W6 1294 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 STAG2Q8N3U4 1231 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 SPZ1Q9BXG8 430 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 IFIH1Q9BYX4 1025 aaKnown RBP14.73□□□□□ -0.05
VRK3-209ENST00000594948 ANKRD2Q9GZV1 360 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 GOLGA6AQ9NYA3 693 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 STK17AQ9UEE5 414 aa14.73□□□□□ -0.05
VRK3-209ENST00000594948 STRCQ7RTU9 1775 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 DDX60LQ5H9U9 1706 aaKnown RBP14.72□□□□□ -0.05
VRK3-209ENST00000594948 HIBADHP31937 336 aaKnown RBP14.72□□□□□ -0.05
VRK3-209ENST00000594948 KIF11P52732 1056 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 EVX2Q03828 476 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 STK4Q13043 487 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
VRK3-209ENST00000594948 CCDC96Q2M329 555 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 ERFEQ4G0M1 354 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 RNF10Q8N5U6 811 aaKnown RBP14.72□□□□□ -0.05
VRK3-209ENST00000594948 SPATA4Q8NEY3 305 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 ARHGAP20Q9P2F6 1191 aa14.72□□□□□ -0.05
VRK3-209ENST00000594948 A0A087WUV0 522 aaPredicted RBP14.71□□□□□ -0.05
VRK3-209ENST00000594948 SSU72P8A0A1W2PR75 194 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 MACROD2A1Z1Q3 448 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 SKOR1P84550 965 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 CYP27A1Q02318 531 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 APBA1Q02410 837 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
VRK3-209ENST00000594948 TXNRD1Q16881 649 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 UNC13DQ70J99 1090 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 GUF1Q8N442 669 aaKnown RBP14.71□□□□□ -0.05
VRK3-209ENST00000594948 CALML4Q96GE6 196 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 OSBPL9Q96SU4 736 aa14.71□□□□□ -0.05
VRK3-209ENST00000594948 MCM9Q9NXL9 1143 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms