RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SEC23AQ15436 765 aa27.42■■□□□ 1.98
LSM4-204ENST00000594828 RGS22Q8NE09 1264 aa27.42■■□□□ 1.98
LSM4-204ENST00000594828 MPHOSPH6Q99547 160 aaKnown RBP27.42■■□□□ 1.98
LSM4-204ENST00000594828 VAT1LQ9HCJ6 419 aa27.42■■□□□ 1.98
LSM4-204ENST00000594828 Q9Y3F1 56 aa27.42■■□□□ 1.98
LSM4-204ENST00000594828 LTBP2Q14767 1821 aa27.41■■□□□ 1.98
LSM4-204ENST00000594828 LCTP09848 1927 aa27.41■■□□□ 1.98
LSM4-204ENST00000594828 RAG1P15918 1043 aa27.41■■□□□ 1.98
LSM4-204ENST00000594828 CDK7P50613 346 aa27.41■■□□□ 1.98
LSM4-204ENST00000594828 SZT2Q5T011 3432 aa27.41■■□□□ 1.98
LSM4-204ENST00000594828 MROH7Q68CQ1 1323 aa27.41■■□□□ 1.98
LSM4-204ENST00000594828 A0A0U1RQG5 324 aaPredicted RBP27.4■■□□□ 1.98
LSM4-204ENST00000594828 ITGB8P26012 769 aa27.4■■□□□ 1.98
LSM4-204ENST00000594828 FSCN1Q16658 493 aaKnown RBP27.4■■□□□ 1.98
LSM4-204ENST00000594828 TMEM63BQ5T3F8 832 aa27.4■■□□□ 1.98
LSM4-204ENST00000594828 DNERQ8NFT8 737 aa27.4■■□□□ 1.98
LSM4-204ENST00000594828 JMJD4Q9H9V9 463 aa27.4■■□□□ 1.98
LSM4-204ENST00000594828 ABCB11O95342 1321 aa27.4■■□□□ 1.98
LSM4-204ENST00000594828 E7EWF7 191 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 ARVCFO00192 962 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 ZEB2O60315 1214 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 PTGS1P23219 599 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 PDE4DQ08499 809 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 QRICH1Q2TAL8 776 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 RALYLQ86SE5 291 aaKnown RBP27.39■■□□□ 1.98
LSM4-204ENST00000594828 NCOA7Q8NI08 942 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 MAP4K1Q92918 833 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 MAF1Q9H063 256 aa27.39■■□□□ 1.98
LSM4-204ENST00000594828 LRRC37A2A6NM11 1700 aa27.38■■□□□ 1.97
LSM4-204ENST00000594828 B4DLN1 442 aa27.38■■□□□ 1.97
LSM4-204ENST00000594828 IFIT3O14879 490 aaKnown RBP27.38■■□□□ 1.97
LSM4-204ENST00000594828 MRPL12P52815 198 aaKnown RBP27.38■■□□□ 1.97
LSM4-204ENST00000594828 SHHQ15465 462 aa27.38■■□□□ 1.97
LSM4-204ENST00000594828 DUSP28Q4G0W2 176 aa27.38■■□□□ 1.97
LSM4-204ENST00000594828 CXCL17Q6UXB2 119 aa27.38■■□□□ 1.97
LSM4-204ENST00000594828 STAG2Q8N3U4 1231 aa27.38■■□□□ 1.97
LSM4-204ENST00000594828 WDR11Q9BZH6 1224 aa27.38■■□□□ 1.97
LSM4-204ENST00000594828 RBM47A0AV96 593 aaKnown RBP27.37■■□□□ 1.97
LSM4-204ENST00000594828 ERICH2A1L162 156 aa27.37■■□□□ 1.97
LSM4-204ENST00000594828 KLRF2D3W0D1 207 aa27.37■■□□□ 1.97
LSM4-204ENST00000594828 CABYRO75952 493 aa27.37■■□□□ 1.97
LSM4-204ENST00000594828 FBXO11Q86XK2 927 aa27.37■■□□□ 1.97
LSM4-204ENST00000594828 TBC1D5Q92609 795 aa27.37■■□□□ 1.97
LSM4-204ENST00000594828 MRPL11Q9Y3B7 192 aaKnown RBP27.37■■□□□ 1.97
LSM4-204ENST00000594828 TAF6LQ9Y6J9 622 aa27.37■■□□□ 1.97
LSM4-204ENST00000594828 EDNRBP24530 442 aa27.36■■□□□ 1.97
LSM4-204ENST00000594828 C9orf50Q5SZB4 431 aa27.36■■□□□ 1.97
LSM4-204ENST00000594828 MCF2L2Q86YR7 1114 aa27.36■■□□□ 1.97
LSM4-204ENST00000594828 MAD2L2Q9UI95 211 aa27.36■■□□□ 1.97
LSM4-204ENST00000594828 SART3Q15020 963 aaKnown RBP27.35■■□□□ 1.97
LSM4-204ENST00000594828 DEFB123Q8N688 67 aa27.35■■□□□ 1.97
LSM4-204ENST00000594828 TBX21Q9UL17 535 aa27.35■■□□□ 1.97
LSM4-204ENST00000594828 RBM8AQ9Y5S9 174 aaKnown RBP27.35■■□□□ 1.97
LSM4-204ENST00000594828 LAMA3Q16787 3333 aa27.34■■□□□ 1.97
LSM4-204ENST00000594828 PALM3A6NDB9 673 aaPredicted RBP27.34■■□□□ 1.97
LSM4-204ENST00000594828 TLR3O15455 904 aaKnown RBP27.34■■□□□ 1.97
LSM4-204ENST00000594828 WTAPQ15007 396 aa27.34■■□□□ 1.97
LSM4-204ENST00000594828 STOX1Q6ZVD7 989 aa27.34■■□□□ 1.97
LSM4-204ENST00000594828 CHST3Q7LGC8 479 aa27.34■■□□□ 1.97
LSM4-204ENST00000594828 FAM126BQ8IXS8 530 aa27.34■■□□□ 1.97
LSM4-204ENST00000594828 AMNQ9BXJ7 453 aa27.34■■□□□ 1.97
LSM4-204ENST00000594828 TIMP1P01033 207 aa27.33■■□□□ 1.97
LSM4-204ENST00000594828 FPGSQ05932 587 aa27.33■■□□□ 1.97
LSM4-204ENST00000594828 ITGA7Q13683 1181 aa27.33■■□□□ 1.97
LSM4-204ENST00000594828 Q7L0L9 218 aa27.33■■□□□ 1.97
LSM4-204ENST00000594828 SLC43A3Q8NBI5 491 aa27.33■■□□□ 1.97
LSM4-204ENST00000594828 SYTL5Q8TDW5 730 aaPredicted RBP27.33■■□□□ 1.97
LSM4-204ENST00000594828 SCFD2Q8WU76 684 aa27.33■■□□□ 1.97
LSM4-204ENST00000594828 TAAR1Q96RJ0 339 aa27.33■■□□□ 1.97
LSM4-204ENST00000594828 GRM4Q14833 912 aa27.32■■□□□ 1.96
LSM4-204ENST00000594828 NSUN6Q8TEA1 469 aaKnown RBP27.32■■□□□ 1.96
LSM4-204ENST00000594828 MTMR8Q96EF0 704 aa27.32■■□□□ 1.96
LSM4-204ENST00000594828 SEZ6LQ9BYH1 1024 aa27.32■■□□□ 1.96
LSM4-204ENST00000594828 SENP2Q9HC62 589 aa27.32■■□□□ 1.96
LSM4-204ENST00000594828 NKRFO15226 690 aaKnown RBP eCLIP27.31■■□□□ 1.96
LSM4-204ENST00000594828 EPHB4P54760 987 aa27.31■■□□□ 1.96
LSM4-204ENST00000594828 PPP2R5BQ15173 497 aa27.31■■□□□ 1.96
LSM4-204ENST00000594828 TMEM67Q5HYA8 995 aa27.31■■□□□ 1.96
LSM4-204ENST00000594828 CENPQQ7L2Z9 268 aaPredicted RBP27.31■■□□□ 1.96
LSM4-204ENST00000594828 OR6J1Q8NGC5 347 aa27.31■■□□□ 1.96
LSM4-204ENST00000594828 COL20A1Q9P218 1284 aa27.31■■□□□ 1.96
LSM4-204ENST00000594828 ZBTB5O15062 677 aa27.3■■□□□ 1.96
LSM4-204ENST00000594828 CD4P01730 458 aa27.3■■□□□ 1.96
LSM4-204ENST00000594828 CPT1AP50416 773 aa27.3■■□□□ 1.96
LSM4-204ENST00000594828 MFSD5Q6N075 450 aa27.3■■□□□ 1.96
LSM4-204ENST00000594828 MB21D2Q8IYB1 491 aaPredicted RBP27.3■■□□□ 1.96
LSM4-204ENST00000594828 RMDN3Q96TC7 470 aa27.3■■□□□ 1.96
LSM4-204ENST00000594828 POLR3EQ9NVU0 708 aa27.3■■□□□ 1.96
LSM4-204ENST00000594828 GRIN2DO15399 1336 aa27.3■■□□□ 1.96
LSM4-204ENST00000594828 CFBP00751 764 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 TXNP10599 105 aaKnown RBP27.29■■□□□ 1.96
LSM4-204ENST00000594828 ANTXR2P58335 489 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 PSMC6P62333 389 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 TROAPQ12815 778 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 TTLL4Q14679 1199 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 BRDTQ58F21 947 aaPredicted RBP27.29■■□□□ 1.96
LSM4-204ENST00000594828 CATIPQ7Z7H3 387 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 IGDCC4Q8TDY8 1250 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 IWS1Q96ST2 819 aa27.29■■□□□ 1.96
LSM4-204ENST00000594828 ESYT1Q9BSJ8 1104 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms