RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 RNF207Q6ZRF8 634 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 HOMER1Q86YM7 354 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
XRCC1-204ENST00000594511 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
XRCC1-204ENST00000594511 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
XRCC1-204ENST00000594511 HOMER2Q9NSB8 354 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 BARHL2Q9NY43 387 aa12.95□□□□□ -0.34
XRCC1-204ENST00000594511 SEC63Q9UGP8 760 aaKnown RBP12.95□□□□□ -0.34
XRCC1-204ENST00000594511 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
XRCC1-204ENST00000594511 STK36Q9NRP7 1315 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 POTEB2H3BUK9 544 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 STXBP3O00186 592 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 MEIS2O14770 477 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
XRCC1-204ENST00000594511 SNAI1O95863 264 aaPredicted RBP12.94□□□□□ -0.34
XRCC1-204ENST00000594511 SCG2P13521 617 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 TYW1BQ6NUM6 668 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 TINF2Q9BSI4 451 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 KATNBL1Q9H079 304 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 SH3GLB2Q9NR46 395 aa12.94□□□□□ -0.34
XRCC1-204ENST00000594511 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 ST18O60284 1047 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
XRCC1-204ENST00000594511 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
XRCC1-204ENST00000594511 ELNP15502 786 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 CAPN2P17655 700 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 CACNB2Q08289 660 aaPredicted RBP12.93□□□□□ -0.34
XRCC1-204ENST00000594511 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
XRCC1-204ENST00000594511 NSMFQ6X4W1 530 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 SLC30A10Q6XR72 485 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 PHKBQ93100 1093 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
XRCC1-204ENST00000594511 ZMYND12Q9H0C1 365 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 COL20A1Q9P218 1284 aa12.93□□□□□ -0.34
XRCC1-204ENST00000594511 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
XRCC1-204ENST00000594511 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 hCG_1642624A0A1W2PR95 340 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 ASB14A6NK59 587 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 CPLX1O14810 134 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 CDKL5O76039 1030 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 DEXIO95424 95 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 INHAP05111 366 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 CYBAP13498 195 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 CLK2P49760 499 aaKnown RBP12.92□□□□□ -0.34
XRCC1-204ENST00000594511 UBXN2AP68543 259 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 SSRP1Q08945 709 aaKnown RBP12.92□□□□□ -0.34
XRCC1-204ENST00000594511 TRIM32Q13049 653 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 STK3Q13188 491 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 MFSD14CQ5VZR4 134 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 TNS4Q8IZW8 715 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 NECAB1Q8N987 351 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 NSUN7Q8NE18 718 aaKnown RBP12.92□□□□□ -0.34
XRCC1-204ENST00000594511 TRPV1Q8NER1 839 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 SH3TC2Q8TF17 1288 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 TAAR1Q96RJ0 339 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 IWS1Q96ST2 819 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 RIC8AQ9NPQ8 531 aa12.92□□□□□ -0.34
XRCC1-204ENST00000594511 PAK6Q9NQU5 681 aaPredicted RBP12.92□□□□□ -0.34
XRCC1-204ENST00000594511 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
XRCC1-204ENST00000594511 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
XRCC1-204ENST00000594511 PTPDC1A2A3K4 754 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 GCOM1H8Y6P7 765 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-204ENST00000594511 POLR2MP0CAP2 368 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 ZNF865P0CJ78 1059 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-204ENST00000594511 CYP2C19P33261 490 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 ALDH5A1P51649 535 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-204ENST00000594511 TRIM22Q8IYM9 498 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
XRCC1-204ENST00000594511 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
XRCC1-204ENST00000594511 SNX21Q969T3 373 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 PURBQ96QR8 312 aaKnown RBP12.91□□□□□ -0.34
XRCC1-204ENST00000594511 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 PSTPIP2Q9H939 334 aa12.91□□□□□ -0.34
XRCC1-204ENST00000594511 CFBP00751 764 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 MRPL12P52815 198 aaKnown RBP12.9□□□□□ -0.34
XRCC1-204ENST00000594511 NKX3-2P78367 333 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 AKAP17AQ02040 695 aaKnown RBP12.9□□□□□ -0.34
XRCC1-204ENST00000594511 CUL4AQ13619 759 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 MTFR1Q15390 333 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 NPY5RQ15761 445 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 HEATR3Q7Z4Q2 680 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
XRCC1-204ENST00000594511 TMX3Q96JJ7 454 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 ABHD16BQ9H3Z7 469 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 PXMP2Q9NR77 195 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.9□□□□□ -0.34
XRCC1-204ENST00000594511 MCM3APO60318 1980 aa12.9□□□□□ -0.34
XRCC1-204ENST00000594511 LRRC37A2A6NM11 1700 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms