RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 B4GALT4O60513 344 aa18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 SNHG28P0DPA3 235 aa18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 PDHBP11177 359 aa18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 ALDH5A1P51649 535 aaPredicted RBP18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 TTC14Q96N46 770 aa18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 GPCPD1Q9NPB8 672 aa18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 CHD7Q9P2D1 2997 aa18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 ADD3Q9UEY8 706 aaKnown RBP18.75■□□□□ 0.59
GTF2F1-203ENST00000594213 FGBP02675 491 aa18.74■□□□□ 0.59
GTF2F1-203ENST00000594213 PSMC6P62333 389 aa18.74■□□□□ 0.59
GTF2F1-203ENST00000594213 NMIQ13287 307 aaPredicted RBP18.74■□□□□ 0.59
GTF2F1-203ENST00000594213 WNT8AQ9H1J5 351 aa18.74■□□□□ 0.59
GTF2F1-203ENST00000594213 ZBTB47Q9UFB7 747 aaPredicted RBP18.74■□□□□ 0.59
GTF2F1-203ENST00000594213 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
GTF2F1-203ENST00000594213 EDNRBP24530 442 aa18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 ZNF543Q08ER8 600 aa18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 RRP12Q5JTH9 1297 aaKnown RBP18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 SLC30A10Q6XR72 485 aa18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 WDR11Q9BZH6 1224 aa18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 TOMM22Q9NS69 142 aa18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 MUC3AQ02505 3323 aa18.73■□□□□ 0.59
GTF2F1-203ENST00000594213 PCP11498 1178 aaKnown RBP18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 CCL23P55773 120 aa18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 HAND2P61296 217 aa18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 AKNAD1Q5T1N1 836 aa18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 TBC1D10CQ8IV04 446 aa18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 PNMA2Q9UL42 364 aa18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 CCDC171Q6TFL3 1326 aa18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 WDR19Q8NEZ3 1342 aa18.72■□□□□ 0.59
GTF2F1-203ENST00000594213 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
GTF2F1-203ENST00000594213 PURAQ00577 322 aaKnown RBP18.71■□□□□ 0.59
GTF2F1-203ENST00000594213 ADGRE1Q14246 886 aa18.71■□□□□ 0.59
GTF2F1-203ENST00000594213 PRDM12Q9H4Q4 367 aa18.71■□□□□ 0.59
GTF2F1-203ENST00000594213 POLR3EQ9NVU0 708 aa18.71■□□□□ 0.59
GTF2F1-203ENST00000594213 YBX2Q9Y2T7 364 aaKnown RBP18.71■□□□□ 0.59
GTF2F1-203ENST00000594213 LRRC37A2A6NM11 1700 aa18.71■□□□□ 0.59
GTF2F1-203ENST00000594213 RPS6P62753 249 aaKnown RBP18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 RAB30Q15771 203 aa18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 RNF207Q6ZRF8 634 aa18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 MFSD6Q6ZSS7 791 aa18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 RGS22Q8NE09 1264 aa18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 TRMT13Q9NUP7 481 aaKnown RBP18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 MSRAQ9UJ68 235 aa18.7■□□□□ 0.58
GTF2F1-203ENST00000594213 LCTP09848 1927 aa18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 CALML3P27482 149 aa18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 DGKHQ86XP1 1220 aa18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 RPUSD2Q8IZ73 545 aaKnown RBP18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 DNERQ8NFT8 737 aa18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 LNPKQ9C0E8 428 aa18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 MTIF3Q9H2K0 278 aaKnown RBP18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 PRDM6Q9NQX0 595 aa18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 MYO9BQ13459 2157 aa18.69■□□□□ 0.58
GTF2F1-203ENST00000594213 A6NJR5 290 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 NKRFO15226 690 aaKnown RBP eCLIP18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 SUPT20HL2P0C7V6 817 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 CYP2C9P11712 490 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 SDSP20132 328 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 CPT1AP50416 773 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 ANKS1AQ92625 1134 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 SYMPKQ92797 1274 aaKnown RBP18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 SCLYQ96I15 445 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 GAS2L1Q99501 681 aaPredicted RBP18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 MTG1Q9BT17 334 aaPredicted RBP18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 NKX2-4Q9H2Z4 354 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 RNF41Q9H4P4 317 aaPredicted RBP18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 TNKSO95271 1327 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 NEDD4P46934 1319 aa18.68■□□□□ 0.58
GTF2F1-203ENST00000594213 MYL3P08590 195 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 PDE4DQ08499 809 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 NBPF20Q3BBV1 942 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 TJAP1Q5JTD0 557 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 GPATCH4Q5T3I0 446 aaKnown RBP18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 PLEKHM2Q8IWE5 1019 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 SCFD2Q8WU76 684 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 ESR2Q92731 530 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 COPS5Q92905 334 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 MAF1Q9H063 256 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
GTF2F1-203ENST00000594213 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 ARIH2O95376 493 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 NT5C2P49902 561 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 AAMPQ13685 434 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 TTLL4Q14679 1199 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 PPP2R5BQ15173 497 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 CCDC62Q6P9F0 684 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 TBC1D5Q92609 795 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 RILPL2Q969X0 211 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 UBA5Q9GZZ9 404 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 CPVLQ9H3G5 476 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 SLC4A7Q9Y6M7 1214 aa18.66■□□□□ 0.58
GTF2F1-203ENST00000594213 KPNA6O60684 536 aa18.65■□□□□ 0.58
GTF2F1-203ENST00000594213 PFKMP08237 780 aa18.65■□□□□ 0.58
GTF2F1-203ENST00000594213 RABGGTBP53611 331 aa18.65■□□□□ 0.58
GTF2F1-203ENST00000594213 NFRKBQ6P4R8 1299 aa18.65■□□□□ 0.58
GTF2F1-203ENST00000594213 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms