RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 FTOQ9C0B1 505 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMG9-202ENST00000594081 VTA1Q9NP79 307 aa10.13□□□□□ -0.79
SMG9-202ENST00000594081 POLR3EQ9NVU0 708 aa10.13□□□□□ -0.79
SMG9-202ENST00000594081 TMEM232C9JQI7 657 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 TTLL1O95922 423 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 IQCF3P0C7M6 154 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 FDX1P10109 184 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 ALAS1P13196 640 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
SMG9-202ENST00000594081 CPT1AP50416 773 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 NHLH1Q02575 133 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 IKQ13123 557 aaPredicted RBP10.12□□□□□ -0.79
SMG9-202ENST00000594081 TKFCQ3LXA3 575 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 DUSP28Q4G0W2 176 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 MUM1L1Q5H9M0 696 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 SLFN13Q68D06 897 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 TMCO2Q7Z6W1 182 aaPredicted RBP10.12□□□□□ -0.79
SMG9-202ENST00000594081 FAM178BQ8IXR5 827 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 PPP1R13LQ8WUF5 828 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 MKL1Q969V6 931 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 TRERF1Q96PN7 1200 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 UIMC1Q96RL1 719 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 HAUS7Q99871 368 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 MTMR4Q9NYA4 1195 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 CYP39A1Q9NYL5 469 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 MTUS1Q9ULD2 1270 aa10.12□□□□□ -0.79
SMG9-202ENST00000594081 GSG1L2A8MUP6 293 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 MINDY4BA8MYZ0 360 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 PRDM1O75626 825 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 IL9P15248 144 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 ATP5JP18859 108 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 KCNA5P22460 613 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 WDR5P61964 334 aaKnown RBP10.11□□□□□ -0.79
SMG9-202ENST00000594081 DEFB103AP81534 67 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 NBPF20Q3BBV1 942 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 LEXMQ3ZCV2 418 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 NFRKBQ6P4R8 1299 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 FAM160B2Q86V87 743 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 RETREG2Q8NC44 543 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 OR6J1Q8NGC5 347 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 MORC4Q8TE76 937 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
SMG9-202ENST00000594081 MTG1Q9BT17 334 aaPredicted RBP10.11□□□□□ -0.79
SMG9-202ENST00000594081 EPB41L4AQ9HCS5 686 aaPredicted RBP10.11□□□□□ -0.79
SMG9-202ENST00000594081 LMCD1Q9NZU5 365 aa10.11□□□□□ -0.79
SMG9-202ENST00000594081 RAD50Q92878 1312 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 TRIP12Q14669 1992 aaPredicted RBP10.1□□□□□ -0.79
SMG9-202ENST00000594081 ALADP13716 330 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 SLC1A4P43007 532 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 ALDH5A1P51649 535 aaPredicted RBP10.1□□□□□ -0.79
SMG9-202ENST00000594081 SNAP25P60880 206 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 BFSP2Q13515 415 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 ZSCAN25Q6NSZ9 544 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 NSMFQ6X4W1 530 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 RASGRP2Q7LDG7 609 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
SMG9-202ENST00000594081 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.1□□□□□ -0.79
SMG9-202ENST00000594081 CHMP4CQ96CF2 233 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 GMCL1Q96IK5 515 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 FBXL18Q96ME1 805 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 STRBPQ96SI9 672 aaKnown RBP10.1□□□□□ -0.79
SMG9-202ENST00000594081 WDR11Q9BZH6 1224 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 SUGCTQ9HAC7 445 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 ZNF287Q9HBT7 754 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
SMG9-202ENST00000594081 NOD1Q9Y239 953 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 ZNF318Q5VUA4 2279 aa10.1□□□□□ -0.79
SMG9-202ENST00000594081 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.09□□□□□ -0.79
SMG9-202ENST00000594081 TDO2P48775 406 aa10.09□□□□□ -0.79
SMG9-202ENST00000594081 PPP2R5BQ15173 497 aa10.09□□□□□ -0.79
SMG9-202ENST00000594081 LRRFIP1Q32MZ4 808 aaKnown RBP10.09□□□□□ -0.79
SMG9-202ENST00000594081 PTCRAQ6ISU1 281 aaPredicted RBP10.09□□□□□ -0.79
SMG9-202ENST00000594081 GIMAP6Q6P9H5 292 aa10.09□□□□□ -0.79
SMG9-202ENST00000594081 CHURC1Q8WUH1 139 aa10.09□□□□□ -0.79
SMG9-202ENST00000594081 STAG1Q8WVM7 1258 aa10.09□□□□□ -0.79
SMG9-202ENST00000594081 TGS1Q96RS0 853 aaKnown RBP10.09□□□□□ -0.79
SMG9-202ENST00000594081 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
SMG9-202ENST00000594081 CCPG1Q9ULG6 757 aa10.09□□□□□ -0.79
SMG9-202ENST00000594081 ATG2AQ2TAZ0 1938 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 RBM47A0AV96 593 aaKnown RBP10.08□□□□□ -0.8
SMG9-202ENST00000594081 LINC01553A4QN01 128 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 DCXO43602 365 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 GJB5O95377 273 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 TSPY3P0CV98 308 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 TSPY8P0CW00 308 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 MCCP23508 829 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 ERVK-21P61565 698 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 PTPN11Q06124 597 aaPredicted RBP10.08□□□□□ -0.8
SMG9-202ENST00000594081 BRDTQ58F21 947 aaPredicted RBP10.08□□□□□ -0.8
SMG9-202ENST00000594081 CNKSR3Q6P9H4 555 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 KCTD1Q719H9 257 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 LRRC8DQ7L1W4 858 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 CCDC155Q8N6L0 562 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 CAGE1Q8TC20 777 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 AFAP1L1Q8TED9 768 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 KCNH6Q9H252 994 aa10.08□□□□□ -0.8
SMG9-202ENST00000594081 ADD3Q9UEY8 706 aaKnown RBP10.08□□□□□ -0.8
SMG9-202ENST00000594081 PRR12Q9ULL5 1215 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms