RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 HAND2P61296 217 aa19.28■□□□□ 0.68
LIG1-205ENST00000593425 DUSP28Q4G0W2 176 aa19.28■□□□□ 0.68
LIG1-205ENST00000593425 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
LIG1-205ENST00000593425 PRDM12Q9H4Q4 367 aa19.28■□□□□ 0.68
LIG1-205ENST00000593425 PRDM6Q9NQX0 595 aa19.28■□□□□ 0.68
LIG1-205ENST00000593425 TCP11L1Q9NUJ3 509 aa19.28■□□□□ 0.68
LIG1-205ENST00000593425 ADD3Q9UEY8 706 aaKnown RBP19.28■□□□□ 0.68
LIG1-205ENST00000593425 SPTBN5Q9NRC6 3674 aaKnown RBP19.28■□□□□ 0.68
LIG1-205ENST00000593425 ZMYM6O95789 1325 aa19.27■□□□□ 0.68
LIG1-205ENST00000593425 PTPDC1A2A3K4 754 aa19.27■□□□□ 0.68
LIG1-205ENST00000593425 FGBP02675 491 aa19.27■□□□□ 0.68
LIG1-205ENST00000593425 NMIQ13287 307 aaPredicted RBP19.27■□□□□ 0.68
LIG1-205ENST00000593425 OTOP2Q7RTS6 562 aa19.27■□□□□ 0.68
LIG1-205ENST00000593425 CLEC4DQ8WXI8 215 aa19.27■□□□□ 0.68
LIG1-205ENST00000593425 VWCEQ96DN2 955 aa19.27■□□□□ 0.68
LIG1-205ENST00000593425 LAMA4Q16363 1823 aa19.27■□□□□ 0.68
LIG1-205ENST00000593425 SCN5AQ14524 2016 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 CALML3P27482 149 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 RAB30Q15771 203 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 TBC1D10CQ8IV04 446 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 SCLYQ96I15 445 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 GAS2L1Q99501 681 aaPredicted RBP19.26■□□□□ 0.67
LIG1-205ENST00000593425 SEZ6LQ9BYH1 1024 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 WDR11Q9BZH6 1224 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 ALDH8A1Q9H2A2 487 aaPredicted RBP19.26■□□□□ 0.67
LIG1-205ENST00000593425 NKX2-4Q9H2Z4 354 aa19.26■□□□□ 0.67
LIG1-205ENST00000593425 YBX2Q9Y2T7 364 aaKnown RBP19.26■□□□□ 0.67
LIG1-205ENST00000593425 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
LIG1-205ENST00000593425 RBM47A0AV96 593 aaKnown RBP19.25■□□□□ 0.67
LIG1-205ENST00000593425 PURAQ00577 322 aaKnown RBP19.25■□□□□ 0.67
LIG1-205ENST00000593425 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
LIG1-205ENST00000593425 HDAC1Q13547 482 aaPredicted RBP19.25■□□□□ 0.67
LIG1-205ENST00000593425 ADGRE1Q14246 886 aa19.25■□□□□ 0.67
LIG1-205ENST00000593425 PPM1EQ8WY54 764 aa19.25■□□□□ 0.67
LIG1-205ENST00000593425 MTIF3Q9H2K0 278 aaKnown RBP19.25■□□□□ 0.67
LIG1-205ENST00000593425 TRMT13Q9NUP7 481 aaKnown RBP19.25■□□□□ 0.67
LIG1-205ENST00000593425 MSRAQ9UJ68 235 aa19.25■□□□□ 0.67
LIG1-205ENST00000593425 SCN10AQ9Y5Y9 1956 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 TANC1Q9C0D5 1861 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 LOC102724159A0A0B4J2E5 919 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 MYL3P08590 195 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 RPS6P62753 249 aaKnown RBP19.24■□□□□ 0.67
LIG1-205ENST00000593425 PWP2Q15269 919 aaKnown RBP19.24■□□□□ 0.67
LIG1-205ENST00000593425 RNF207Q6ZRF8 634 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 OR6J1Q8NGC5 347 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 POLR3EQ9NVU0 708 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 NEDD4P46934 1319 aa19.24■□□□□ 0.67
LIG1-205ENST00000593425 TRIM6-TRIM34B2RNG4 842 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 CYP2C9P11712 490 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 RABGGTBP53611 331 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 TJAP1Q5JTD0 557 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 AKNAD1Q5T1N1 836 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 MFSD6Q6ZSS7 791 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 PPP1R13LQ8WUF5 828 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 SYMPKQ92797 1274 aaKnown RBP19.23■□□□□ 0.67
LIG1-205ENST00000593425 LNPKQ9C0E8 428 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 CPVLQ9H3G5 476 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 TNKSO95271 1327 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 WDR19Q8NEZ3 1342 aa19.23■□□□□ 0.67
LIG1-205ENST00000593425 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
LIG1-205ENST00000593425 EDNRBP24530 442 aa19.22■□□□□ 0.67
LIG1-205ENST00000593425 CPT1AP50416 773 aa19.22■□□□□ 0.67
LIG1-205ENST00000593425 PDE4DQ08499 809 aa19.22■□□□□ 0.67
LIG1-205ENST00000593425 COPS5Q92905 334 aa19.22■□□□□ 0.67
LIG1-205ENST00000593425 TTC14Q96N46 770 aa19.22■□□□□ 0.67
LIG1-205ENST00000593425 ZKSCAN3Q9BRR0 538 aa19.22■□□□□ 0.67
LIG1-205ENST00000593425 MYOGP15173 224 aa19.21■□□□□ 0.67
LIG1-205ENST00000593425 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
LIG1-205ENST00000593425 TICAM2Q86XR7 235 aa19.21■□□□□ 0.67
LIG1-205ENST00000593425 RPUSD2Q8IZ73 545 aaKnown RBP19.21■□□□□ 0.67
LIG1-205ENST00000593425 RILPL2Q969X0 211 aa19.21■□□□□ 0.67
LIG1-205ENST00000593425 MTG1Q9BT17 334 aaPredicted RBP19.21■□□□□ 0.67
LIG1-205ENST00000593425 SLC28A3Q9HAS3 691 aa19.21■□□□□ 0.67
LIG1-205ENST00000593425 SLC4A7Q9Y6M7 1214 aa19.21■□□□□ 0.67
LIG1-205ENST00000593425 ZBBXA8MT70 800 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 ARIH2O95376 493 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 PCP11498 1178 aaKnown RBP19.2■□□□□ 0.66
LIG1-205ENST00000593425 IGFBP4P22692 258 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 TTLL4Q14679 1199 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 CCDC85BQ15834 202 aaPredicted RBP19.2■□□□□ 0.66
LIG1-205ENST00000593425 USH1GQ495M9 461 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 FAM47CQ5HY64 1035 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 DNERQ8NFT8 737 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 PNMA2Q9UL42 364 aa19.2■□□□□ 0.66
LIG1-205ENST00000593425 NKRFO15226 690 aaKnown RBP eCLIP19.19■□□□□ 0.66
LIG1-205ENST00000593425 SUPT20HL2P0C7V6 817 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 SDSP20132 328 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 NBPF20Q3BBV1 942 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 PPP2R2DQ66LE6 453 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 DEFB128Q7Z7B8 93 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 SCFD2Q8WU76 684 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 UBA5Q9GZZ9 404 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 GPHNQ9NQX3 736 aaPredicted RBP19.19■□□□□ 0.66
LIG1-205ENST00000593425 THEGQ9P2T0 379 aa19.19■□□□□ 0.66
LIG1-205ENST00000593425 CHD9Q3L8U1 2897 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 MYH6P13533 1939 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 KIAA1217Q5T5P2 1943 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 A6NJR5 290 aa19.18■□□□□ 0.66
LIG1-205ENST00000593425 GPATCH4Q5T3I0 446 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms