RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 PCDHA1Q9Y5I3 950 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
TRIM47-206ENST00000592942 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
TRIM47-206ENST00000592942 TFRCP02786 760 aaKnown RBP17.76■□□□□ 0.43
TRIM47-206ENST00000592942 RCAN1P53805 252 aa17.76■□□□□ 0.43
TRIM47-206ENST00000592942 GHRHRQ02643 423 aa17.76■□□□□ 0.43
TRIM47-206ENST00000592942 CCDC82Q8N4S0 544 aa17.76■□□□□ 0.43
TRIM47-206ENST00000592942 MORC4Q8TE76 937 aa17.76■□□□□ 0.43
TRIM47-206ENST00000592942 PIBF1Q8WXW3 757 aa17.76■□□□□ 0.43
TRIM47-206ENST00000592942 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.76■□□□□ 0.43
TRIM47-206ENST00000592942 DDX20Q9UHI6 824 aaKnown RBP17.76■□□□□ 0.43
TRIM47-206ENST00000592942 MYH6P13533 1939 aa17.76■□□□□ 0.43
TRIM47-206ENST00000592942 SEPT4O43236 478 aa17.75■□□□□ 0.43
TRIM47-206ENST00000592942 CALML3P27482 149 aa17.75■□□□□ 0.43
TRIM47-206ENST00000592942 CNGA1P29973 690 aa17.75■□□□□ 0.43
TRIM47-206ENST00000592942 ADD1P35611 737 aaKnown RBP17.75■□□□□ 0.43
TRIM47-206ENST00000592942 RTN1Q16799 776 aa17.75■□□□□ 0.43
TRIM47-206ENST00000592942 ARMCX2Q7L311 632 aa17.75■□□□□ 0.43
TRIM47-206ENST00000592942 SYTL5Q8TDW5 730 aaPredicted RBP17.75■□□□□ 0.43
TRIM47-206ENST00000592942 LARP6Q9BRS8 491 aaKnown RBP17.75■□□□□ 0.43
TRIM47-206ENST00000592942 MCM3APO60318 1980 aa17.75■□□□□ 0.43
TRIM47-206ENST00000592942 hCG_1642624A0A1W2PR95 340 aa17.74■□□□□ 0.43
TRIM47-206ENST00000592942 EIF5BO60841 1220 aaKnown RBP17.74■□□□□ 0.43
TRIM47-206ENST00000592942 CAPN2P17655 700 aa17.74■□□□□ 0.43
TRIM47-206ENST00000592942 PDIA3P30101 505 aaKnown RBP17.74■□□□□ 0.43
TRIM47-206ENST00000592942 HSD17B4P51659 736 aa17.74■□□□□ 0.43
TRIM47-206ENST00000592942 FGD1P98174 961 aa17.74■□□□□ 0.43
TRIM47-206ENST00000592942 ACVR2BQ13705 512 aa17.74■□□□□ 0.43
TRIM47-206ENST00000592942 ANO1Q5XXA6 986 aa17.74■□□□□ 0.43
TRIM47-206ENST00000592942 RRP36Q96EU6 259 aaKnown RBP17.74■□□□□ 0.43
TRIM47-206ENST00000592942 TAAR1Q96RJ0 339 aa17.74■□□□□ 0.43
TRIM47-206ENST00000592942 ALDH8A1Q9H2A2 487 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-206ENST00000592942 RBM28Q9NW13 759 aaKnown RBP17.74■□□□□ 0.43
TRIM47-206ENST00000592942 CNTNAP5Q8WYK1 1306 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 ASB14A6NK59 587 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 GOLGA8AA7E2F4 631 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 GOLGA8BA8MQT2 603 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 ALDH5A1P51649 535 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-206ENST00000592942 NTRK3Q16288 839 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 MCF2L2Q86YR7 1114 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 ABHD16BQ9H3Z7 469 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 PDRG1Q9NUG6 133 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 NID2Q14112 1375 aa17.73■□□□□ 0.43
TRIM47-206ENST00000592942 ADCY6O43306 1168 aa17.72■□□□□ 0.43
TRIM47-206ENST00000592942 EDNRBP24530 442 aa17.72■□□□□ 0.43
TRIM47-206ENST00000592942 PPP2R5BQ15173 497 aa17.72■□□□□ 0.43
TRIM47-206ENST00000592942 TAPT1Q6NXT6 567 aa17.72■□□□□ 0.43
TRIM47-206ENST00000592942 DNERQ8NFT8 737 aa17.72■□□□□ 0.43
TRIM47-206ENST00000592942 KIF2CQ99661 725 aa17.72■□□□□ 0.43
TRIM47-206ENST00000592942 ADD3Q9UEY8 706 aaKnown RBP17.72■□□□□ 0.43
TRIM47-206ENST00000592942 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
TRIM47-206ENST00000592942 V9GY48 417 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-206ENST00000592942 LOC102724159A0A0B4J2E5 919 aa17.71■□□□□ 0.43
TRIM47-206ENST00000592942 MSCO60682 206 aa17.71■□□□□ 0.43
TRIM47-206ENST00000592942 CFBP00751 764 aa17.71■□□□□ 0.43
TRIM47-206ENST00000592942 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRIM47-206ENST00000592942 PWP2Q15269 919 aaKnown RBP17.71■□□□□ 0.43
TRIM47-206ENST00000592942 CCDC144BQ3MJ40 725 aa17.71■□□□□ 0.43
TRIM47-206ENST00000592942 SAMD3Q8N6K7 520 aa17.71■□□□□ 0.43
TRIM47-206ENST00000592942 ANKLE1Q8NAG6 615 aa17.71■□□□□ 0.43
TRIM47-206ENST00000592942 DIS3LQ8TF46 1054 aaKnown RBP17.71■□□□□ 0.43
TRIM47-206ENST00000592942 ZNF274Q96GC6 653 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-206ENST00000592942 PDGFCQ9NRA1 345 aa17.71■□□□□ 0.43
TRIM47-206ENST00000592942 MAP3K20Q9NYL2 800 aaKnown RBP17.71■□□□□ 0.43
TRIM47-206ENST00000592942 NAP1L2Q9ULW6 460 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-206ENST00000592942 HOXA13P31271 388 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-206ENST00000592942 TRAF1Q13077 416 aa17.7■□□□□ 0.42
TRIM47-206ENST00000592942 TMEM63BQ5T3F8 832 aa17.7■□□□□ 0.42
TRIM47-206ENST00000592942 LENG1Q96BZ8 264 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-206ENST00000592942 PAWRQ96IZ0 340 aaKnown RBP17.7■□□□□ 0.42
TRIM47-206ENST00000592942 ZHX1Q9UKY1 873 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-206ENST00000592942 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-206ENST00000592942 MEIS2O14770 477 aa17.69■□□□□ 0.42
TRIM47-206ENST00000592942 FARP2O94887 1054 aaPredicted RBP17.69■□□□□ 0.42
TRIM47-206ENST00000592942 AKR1A1P14550 325 aa17.69■□□□□ 0.42
TRIM47-206ENST00000592942 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
TRIM47-206ENST00000592942 TYW1BQ6NUM6 668 aa17.69■□□□□ 0.42
TRIM47-206ENST00000592942 EEPD1Q7L9B9 569 aa17.69■□□□□ 0.42
TRIM47-206ENST00000592942 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
TRIM47-206ENST00000592942 SEC63Q9UGP8 760 aaKnown RBP17.69■□□□□ 0.42
TRIM47-206ENST00000592942 FAM184BQ9ULE4 1060 aa17.69■□□□□ 0.42
TRIM47-206ENST00000592942 TPCN1Q9ULQ1 816 aa17.69■□□□□ 0.42
TRIM47-206ENST00000592942 CCDC196A0A1B0GTZ2 297 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 RBM47A0AV96 593 aaKnown RBP17.68■□□□□ 0.42
TRIM47-206ENST00000592942 GCOM1H8Y6P7 765 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-206ENST00000592942 POLR2MP0CAP2 368 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 COL6A1P12109 1028 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 PTGS1P23219 599 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 AK2P54819 239 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-206ENST00000592942 PKN1Q16512 942 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 FBXO16Q8IX29 292 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-206ENST00000592942 NSUN6Q8TEA1 469 aaKnown RBP17.68■□□□□ 0.42
TRIM47-206ENST00000592942 GPKOWQ92917 476 aaPredicted RBP eCLIP17.68■□□□□ 0.42
TRIM47-206ENST00000592942 RMDN3Q96TC7 470 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 PXMP2Q9NR77 195 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 GNEQ9Y223 722 aaKnown RBP17.68■□□□□ 0.42
TRIM47-206ENST00000592942 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
TRIM47-206ENST00000592942 PIK3CDO00329 1044 aa17.67■□□□□ 0.42
TRIM47-206ENST00000592942 CTAGE5O15320 804 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms