RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 DNERQ8NFT8 737 aa15.56■□□□□ 0.08
APOC1-209ENST00000592885 CLEC4DQ8WXI8 215 aa15.56■□□□□ 0.08
APOC1-209ENST00000592885 KRT23Q9C075 422 aa15.56■□□□□ 0.08
APOC1-209ENST00000592885 KAT14Q9H8E8 782 aa15.56■□□□□ 0.08
APOC1-209ENST00000592885 RBM47A0AV96 593 aaKnown RBP15.55■□□□□ 0.08
APOC1-209ENST00000592885 CD4P01730 458 aa15.55■□□□□ 0.08
APOC1-209ENST00000592885 BEX3Q00994 111 aa15.55■□□□□ 0.08
APOC1-209ENST00000592885 SLC30A10Q6XR72 485 aa15.55■□□□□ 0.08
APOC1-209ENST00000592885 TMEM199Q8N511 208 aa15.55■□□□□ 0.08
APOC1-209ENST00000592885 GUCD1Q96NT3 240 aa15.55■□□□□ 0.08
APOC1-209ENST00000592885 ZSCAN10Q96SZ4 725 aaPredicted RBP15.55■□□□□ 0.08
APOC1-209ENST00000592885 MYH6P13533 1939 aa15.55■□□□□ 0.08
APOC1-209ENST00000592885 TNKSO95271 1327 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 ABCB11O95342 1321 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 B4E1Z4 1266 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 NKRFO15226 690 aaKnown RBP eCLIP15.54■□□□□ 0.08
APOC1-209ENST00000592885 DYNC1LI2O43237 492 aaPredicted RBP15.54■□□□□ 0.08
APOC1-209ENST00000592885 EDNRBP24530 442 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 EPHB4P54760 987 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 RPS6P62753 249 aaKnown RBP15.54■□□□□ 0.08
APOC1-209ENST00000592885 CXCL17Q6UXB2 119 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 KIAA1211Q6ZU35 1233 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 EEPD1Q7L9B9 569 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 ENAHQ8N8S7 591 aaPredicted RBP15.54■□□□□ 0.08
APOC1-209ENST00000592885 ZKSCAN3Q9BRR0 538 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 PDGFCQ9NRA1 345 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 POLR3EQ9NVU0 708 aa15.54■□□□□ 0.08
APOC1-209ENST00000592885 CALML3P27482 149 aa15.53■□□□□ 0.08
APOC1-209ENST00000592885 CPT1AP50416 773 aa15.53■□□□□ 0.08
APOC1-209ENST00000592885 PDE4DQ08499 809 aa15.53■□□□□ 0.08
APOC1-209ENST00000592885 ITGA7Q13683 1181 aa15.53■□□□□ 0.08
APOC1-209ENST00000592885 CDC37Q16543 378 aaPredicted RBP15.53■□□□□ 0.08
APOC1-209ENST00000592885 TTC22Q5TAA0 569 aa15.53■□□□□ 0.08
APOC1-209ENST00000592885 PSRC1Q6PGN9 363 aaPredicted RBP15.53■□□□□ 0.08
APOC1-209ENST00000592885 UBAC1Q9BSL1 405 aa15.53■□□□□ 0.08
APOC1-209ENST00000592885 WDR11Q9BZH6 1224 aa15.53■□□□□ 0.08
APOC1-209ENST00000592885 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.52■□□□□ 0.08
APOC1-209ENST00000592885 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.52■□□□□ 0.08
APOC1-209ENST00000592885 PARP1P09874 1014 aaKnown RBP15.52■□□□□ 0.08
APOC1-209ENST00000592885 GOLGA8HP0CJ92 632 aa15.52■□□□□ 0.08
APOC1-209ENST00000592885 PPP2R5BQ15173 497 aa15.52■□□□□ 0.08
APOC1-209ENST00000592885 BRDTQ58F21 947 aaPredicted RBP15.52■□□□□ 0.08
APOC1-209ENST00000592885 SCFD2Q8WU76 684 aa15.52■□□□□ 0.08
APOC1-209ENST00000592885 RUFY2Q8WXA3 655 aa15.52■□□□□ 0.08
APOC1-209ENST00000592885 PURBQ96QR8 312 aaKnown RBP15.52■□□□□ 0.08
APOC1-209ENST00000592885 ZSWIM5Q9P217 1185 aa15.52■□□□□ 0.08
APOC1-209ENST00000592885 DDX49Q9Y6V7 483 aaKnown RBP15.52■□□□□ 0.08
APOC1-209ENST00000592885 GSPT1P15170 499 aaKnown RBP15.51■□□□□ 0.07
APOC1-209ENST00000592885 PDE4AP27815 886 aa15.51■□□□□ 0.07
APOC1-209ENST00000592885 USH1GQ495M9 461 aa15.51■□□□□ 0.07
APOC1-209ENST00000592885 MCF2L2Q86YR7 1114 aa15.51■□□□□ 0.07
APOC1-209ENST00000592885 ADGRF4Q8IZF3 695 aa15.51■□□□□ 0.07
APOC1-209ENST00000592885 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.076e-7■■■■□ 21.5
APOC1-209ENST00000592885 SEMA6BQ9H3T3 888 aa15.51■□□□□ 0.07
APOC1-209ENST00000592885 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
APOC1-209ENST00000592885 COL6A3P12111 3177 aa15.51■□□□□ 0.07
APOC1-209ENST00000592885 SCN10AQ9Y5Y9 1956 aa15.51■□□□□ 0.07
APOC1-209ENST00000592885 GRIN2DO15399 1336 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 KPNA6O60684 536 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 CSF2RAP15509 400 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 PURAQ00577 322 aaKnown RBP15.5■□□□□ 0.07
APOC1-209ENST00000592885 IFIT1BQ5T764 474 aaKnown RBP15.5■□□□□ 0.07
APOC1-209ENST00000592885 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 OR6J1Q8NGC5 347 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 FAM161BQ96MY7 647 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 PPP1R12CQ9BZL4 782 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 UBA5Q9GZZ9 404 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 MTIF3Q9H2K0 278 aaKnown RBP15.5■□□□□ 0.07
APOC1-209ENST00000592885 HIPK3Q9H422 1215 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 IL23AQ9NPF7 189 aa15.5■□□□□ 0.07
APOC1-209ENST00000592885 MRPL11Q9Y3B7 192 aaKnown RBP15.5■□□□□ 0.07
APOC1-209ENST00000592885 KIAA1217Q5T5P2 1943 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 SUPT20HL2P0C7V6 817 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 TRDNQ13061 729 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 TTLL4Q14679 1199 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 QRICH1Q2TAL8 776 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 TMEM240Q5SV17 173 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 FBXO11Q86XK2 927 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 IWS1Q96ST2 819 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 CDX2Q99626 313 aaPredicted RBP15.49■□□□□ 0.07
APOC1-209ENST00000592885 MTG1Q9BT17 334 aaPredicted RBP15.49■□□□□ 0.07
APOC1-209ENST00000592885 IL25Q9H293 177 aa15.49■□□□□ 0.07
APOC1-209ENST00000592885 ALDH8A1Q9H2A2 487 aaPredicted RBP15.49■□□□□ 0.07
APOC1-209ENST00000592885 TTYH1Q9H313 450 aaPredicted RBP15.49■□□□□ 0.07
APOC1-209ENST00000592885 GPHNQ9NQX3 736 aaPredicted RBP15.49■□□□□ 0.07
APOC1-209ENST00000592885 TANC1Q9C0D5 1861 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 A6NJR5 290 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 DHX16O60231 1041 aaKnown RBP15.48■□□□□ 0.07
APOC1-209ENST00000592885 B4GALT4O60513 344 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 PTGS1P23219 599 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 DNAJB2P25686 324 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 PSMC6P62333 389 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 GHRHRQ02643 423 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 SEC23AQ15436 765 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 TMEM63BQ5T3F8 832 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 C16orf59Q7L2K0 433 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 SAMD3Q8N6K7 520 aa15.48■□□□□ 0.07
APOC1-209ENST00000592885 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
APOC1-209ENST00000592885 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
APOC1-209ENST00000592885 CPVLQ9H3G5 476 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 1719.9 ms