RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 CCDC181Q5TID7 509 aa19.99■□□□□ 0.79
SPC24-206ENST00000592540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.99■□□□□ 0.79
SPC24-206ENST00000592540 DCCP43146 1447 aa19.99■□□□□ 0.79
SPC24-206ENST00000592540 NKRFO15226 690 aaKnown RBP eCLIP19.99■□□□□ 0.79
SPC24-206ENST00000592540 HNRNPH1P31943 449 aaKnown RBP19.99■□□□□ 0.79
SPC24-206ENST00000592540 CXCR5P32302 372 aa19.99■□□□□ 0.79
SPC24-206ENST00000592540 FKBP15Q5T1M5 1219 aa19.99■□□□□ 0.79
SPC24-206ENST00000592540 FBXW10Q5XX13 1052 aa19.99■□□□□ 0.79
SPC24-206ENST00000592540 NCAPGQ9BPX3 1015 aa19.99■□□□□ 0.79
SPC24-206ENST00000592540 EHD2Q9NZN4 543 aa19.99■□□□□ 0.79
SPC24-206ENST00000592540 USP17L12C9JPN9 530 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 USP17L21D6R901 530 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 LCA5LO95447 670 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 IGHMBP2P38935 993 aaKnown RBP19.98■□□□□ 0.79
SPC24-206ENST00000592540 KIF11P52732 1056 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 EVX2Q03828 476 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 FAM47AQ5JRC9 791 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 SUSD4Q5VX71 490 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 C2CD5Q86YS7 1000 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 GPKOWQ92917 476 aaPredicted RBP eCLIP19.98■□□□□ 0.794e-6■■■□□ 16.2
SPC24-206ENST00000592540 IQCDQ96DY2 449 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 ALS2CR12Q96Q35 445 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 PSMB7Q99436 277 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 CHRNDQ07001 517 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 PDE4DQ08499 809 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 STK4Q13043 487 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 PDCLQ13371 301 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 ZIM3Q96PE6 472 aa19.98■□□□□ 0.79
SPC24-206ENST00000592540 ORC4O43929 436 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 EIF4A3P38919 411 aaKnown RBP19.97■□□□□ 0.79
SPC24-206ENST00000592540 KCNV1Q6PIU1 500 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 CCDC47Q96A33 483 aaKnown RBP19.97■□□□□ 0.79
SPC24-206ENST00000592540 SH3GLB2Q9NR46 395 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 CCDC194A0A1B0GVG4 234 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 NDUFAB1O14561 156 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 NNTQ13423 1086 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 C8orf74Q6P047 294 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 B4GALNT4Q76KP1 1039 aa19.97■□□□□ 0.79
SPC24-206ENST00000592540 ZNF804BA4D1E1 1349 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 ATXN2Q99700 1313 aaKnown RBP19.96■□□□□ 0.79
SPC24-206ENST00000592540 COL1A1P02452 1464 aaPredicted RBP19.96■□□□□ 0.79
SPC24-206ENST00000592540 M0R2N6 131 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 PAFAH1B1P43034 410 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 MYCBPQ99417 103 aaPredicted RBP19.96■□□□□ 0.79
SPC24-206ENST00000592540 CUEDC2Q9H467 287 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 RBM12Q9NTZ6 932 aaKnown RBP19.96■□□□□ 0.79
SPC24-206ENST00000592540 LAMB1P07942 1786 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 EPHB6O15197 1021 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 NCK2O43639 380 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 FCER1AP12319 257 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 PLCG1P19174 1290 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 KIF5BP33176 963 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 GYG1P46976 350 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 CNPY4Q8N129 248 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 SH2D3CQ8N5H7 860 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 TRIM9Q9C026 710 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 MAGEF1Q9HAY2 307 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 SIK3Q9Y2K2 1263 aa19.96■□□□□ 0.79
SPC24-206ENST00000592540 FLT1P17948 1338 aa19.95■□□□□ 0.78
SPC24-206ENST00000592540 AKR1B10O60218 316 aa19.95■□□□□ 0.78
SPC24-206ENST00000592540 IL6STP40189 918 aaPredicted RBP19.95■□□□□ 0.78
SPC24-206ENST00000592540 INF2Q27J81 1249 aa19.95■□□□□ 0.78
SPC24-206ENST00000592540 GLE1Q53GS7 698 aaKnown RBP19.95■□□□□ 0.78
SPC24-206ENST00000592540 SALL4Q9UJQ4 1053 aa19.95■□□□□ 0.78
SPC24-206ENST00000592540 PCDHA6Q9UN73 950 aa19.95■□□□□ 0.78
SPC24-206ENST00000592540 PCDHA8Q9Y5H6 950 aa19.95■□□□□ 0.78
SPC24-206ENST00000592540 PJA2O43164 708 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 USP8P40818 1118 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 PPP1R2P41236 205 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 ATP1A2P50993 1020 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 ASIC1P78348 528 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 KCTD16Q68DU8 428 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 CADPS2Q86UW7 1296 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 ZNF384Q8TF68 577 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 TLR10Q9BXR5 811 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 FAM207AQ9NSI2 230 aaPredicted RBP19.94■□□□□ 0.78
SPC24-206ENST00000592540 KRT14P02533 472 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 MAGEA1P43355 309 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 VWA3BQ502W6 1294 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 RCSD1Q6JBY9 416 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 CABP7Q86V35 215 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 IQCKQ8N0W5 287 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 PRPF38AQ8NAV1 312 aaKnown RBP19.94■□□□□ 0.78
SPC24-206ENST00000592540 C7orf25Q9BPX7 421 aa19.94■□□□□ 0.78
SPC24-206ENST00000592540 LAD1O00515 517 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 PRPHP41219 470 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 MNAT1P51948 309 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 CCDC91Q7Z6B0 441 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 SPATS2Q86XZ4 545 aaKnown RBP19.93■□□□□ 0.78
SPC24-206ENST00000592540 IFT20Q8IY31 132 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 SEMA6BQ9H3T3 888 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 GDF3Q9NR23 364 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 KDM7AQ6ZMT4 941 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 CCDC155Q8N6L0 562 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 ANKRD13CQ8N6S4 541 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 CCDC43Q96MW1 224 aaKnown RBP19.93■□□□□ 0.78
SPC24-206ENST00000592540 NDST4Q9H3R1 872 aa19.93■□□□□ 0.78
SPC24-206ENST00000592540 CAPN7Q9Y6W3 813 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms