RNA–Protein interactions for RNA: ENST00000592320.6

GFAP-222, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-222	ENST00000592320	ALAS1	P13196	640 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	TAL1	P17542	331 aa	Predicted RBP	13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	XBP1	P17861	261 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	SLC4A3	P48751	1232 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	NAPA	P54920	295 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	FCGRT	P55899	365 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	CCNA1	P78396	465 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	FAM177A1	Q8N128	213 aa	Predicted RBP	13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	DEFB123	Q8N688	67 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	SPRYD3	Q8NCJ5	442 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	CCDC148	Q8NFR7	591 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	COA7	Q96BR5	231 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	AIFM3	Q96NN9	605 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	SH3GLB2	Q9NR46	395 aa		13.85	□□□□□ -0.19
GFAP-222	ENST00000592320	PEX10	O60683	326 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	TFRC	P02786	760 aa	Known RBP	13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	TRIM29	Q14134	588 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320		Q3C1V9	767 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	GPR153	Q6NV75	609 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	SHCBP1	Q8NEM2	672 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	TRERF1	Q96PN7	1200 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	HOMER2	Q9NSB8	354 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	RNF146	Q9NTX7	359 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	VPS54	Q9P1Q0	977 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	RIPK3	Q9Y572	518 aa		13.84	□□□□□ -0.19
GFAP-222	ENST00000592320	CAPN2	P17655	700 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	PDC	P20941	246 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	FOSB	P53539	338 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	TYW1B	Q6NUM6	668 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	NCAPG2	Q86XI2	1143 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	CHST13	Q8NET6	341 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	C8orf76	Q96K31	380 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	CWC22	Q9HCG8	908 aa	Known RBP	13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	FBXO40	Q9UH90	709 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	GABRQ	Q9UN88	632 aa		13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.83	□□□□□ -0.2
GFAP-222	ENST00000592320	ESYT2	A0FGR8	921 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	ADCY3	O60266	1144 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	ERCC3	P19447	782 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	BMP8B	P34820	402 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	NLRP5	P59047	1200 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	LARP1B	Q659C4	914 aa	Known RBP	13.82	□□□□□ -0.2
GFAP-222	ENST00000592320		Q7L0L9	218 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	MCF2L2	Q86YR7	1114 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	CCAR1	Q8IX12	1150 aa	Known RBP	13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	CLEC4D	Q8WXI8	215 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	IPO9	Q96P70	1041 aa	Known RBP	13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	DEFB118	Q96PH6	123 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	GDF15	Q99988	308 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	ZMYND12	Q9H0C1	365 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	GLT8D2	Q9H1C3	349 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	PORCN	Q9H237	461 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	MROH8	Q9H579	483 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	ACAD9	Q9H845	621 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	STXBP5L	Q9Y2K9	1186 aa		13.82	□□□□□ -0.2
GFAP-222	ENST00000592320	SMCO2	A6NFE2	343 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	NFIB	O00712	420 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	INHA	P05111	366 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	ELN	P15502	786 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	CALML3	P27482	149 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	GNA11	P29992	359 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	MAPK4	P31152	587 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	ADCY7	P51828	1080 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	MUM1L1	Q5H9M0	696 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	KRT40	Q6A162	431 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	GALNT17	Q6IS24	598 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	TEX2	Q8IWB9	1127 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	RGS22	Q8NE09	1264 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	FBXO18	Q8NFZ0	1043 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	CUL5	Q93034	780 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	PAWR	Q96IZ0	340 aa	Known RBP	13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	MAF1	Q9H063	256 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	PSTPIP2	Q9H939	334 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	C6orf50	Q9HD87	102 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	RIC8A	Q9NPQ8	531 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	GJB4	Q9NTQ9	266 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320	KCNJ14	Q9UNX9	436 aa		13.81	□□□□□ -0.2
GFAP-222	ENST00000592320		H3BQV1	296 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	OPLAH	O14841	1288 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	FLT3LG	P49771	235 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	MRPL12	P52815	198 aa	Known RBP	13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	GUCY1B3	Q02153	619 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	SAFB	Q15424	915 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	WDR78	Q5VTH9	848 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	SAMD3	Q8N6K7	520 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	DAGLB	Q8NCG7	672 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	BICD2	Q8TD16	824 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	PXYLP1	Q8TE99	480 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	PHF20	Q9BVI0	1012 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	BRMS1	Q9HCU9	246 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	PCDHA4	Q9UN74	947 aa		13.8	□□□□□ -0.2
GFAP-222	ENST00000592320	COL11A1	P12107	1806 aa	Predicted RBP	13.79	□□□□□ -0.2
GFAP-222	ENST00000592320	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.79	□□□□□ -0.2
GFAP-222	ENST00000592320	MMP1	P03956	469 aa		13.79	□□□□□ -0.2
GFAP-222	ENST00000592320	POLR2M	P0CAP2	368 aa		13.79	□□□□□ -0.2
GFAP-222	ENST00000592320	PDIA4	P13667	645 aa	Known RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms