RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 GUCD1Q96NT3 240 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 KATNBL1Q9H079 304 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 DIAPH3Q9NSV4 1193 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 Q9Y3F1 56 aa11.92□□□□□ -0.5
VMP1-214ENST00000592106 FRMPD2Q68DX3 1309 aaPredicted RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 WDR19Q8NEZ3 1342 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 SOWAHBA6NEL2 793 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 ZNF213O14771 459 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 ADCY6O43306 1168 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 SNAP25P60880 206 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 HAND2P61296 217 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 FSCN1Q16658 493 aaKnown RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 MUM1L1Q5H9M0 696 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 GPATCH4Q5T3I0 446 aaKnown RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 PSRC1Q6PGN9 363 aaPredicted RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 ZNF589Q86UQ0 364 aaPredicted RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 CHD1LQ86WJ1 897 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 IQCA1Q86XH1 822 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 FBXO16Q8IX29 292 aaPredicted RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 MTIF3Q9H2K0 278 aaKnown RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 GPCPD1Q9NPB8 672 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 INCENPQ9NQS7 918 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
VMP1-214ENST00000592106 TBX21Q9UL17 535 aa11.91□□□□□ -0.5
VMP1-214ENST00000592106 RAD50Q92878 1312 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.9□□□□□ -0.5
VMP1-214ENST00000592106 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
VMP1-214ENST00000592106 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.9□□□□□ -0.5
VMP1-214ENST00000592106 PTPDC1A2A3K4 754 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 PDHBP11177 359 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 SDSP20132 328 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 ITGB8P26012 769 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 SLC16A2P36021 539 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 CDK7P50613 346 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 ALDH5A1P51649 535 aaPredicted RBP11.9□□□□□ -0.5
VMP1-214ENST00000592106 BEX3Q00994 111 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 BRDTQ58F21 947 aaPredicted RBP11.9□□□□□ -0.5
VMP1-214ENST00000592106 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 EEPD1Q7L9B9 569 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 FAM126BQ8IXS8 530 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
VMP1-214ENST00000592106 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
VMP1-214ENST00000592106 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
VMP1-214ENST00000592106 DYNC1LI2O43237 492 aaPredicted RBP11.89□□□□□ -0.51
VMP1-214ENST00000592106 CPT1AP50416 773 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
VMP1-214ENST00000592106 PDE4DQ08499 809 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 ZNF543Q08ER8 600 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 BAATQ14032 418 aaPredicted RBP11.89□□□□□ -0.51
VMP1-214ENST00000592106 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 CXCL17Q6UXB2 119 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 KIAA1211Q6ZU35 1233 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 YTHDC1Q96MU7 727 aaKnown RBP11.89□□□□□ -0.51
VMP1-214ENST00000592106 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 SEMA6BQ9H3T3 888 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 KAT14Q9H8E8 782 aa11.89□□□□□ -0.51
VMP1-214ENST00000592106 ASTN1O14525 1302 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 RANBP2P49792 3224 aaKnown RBP11.88□□□□□ -0.51
VMP1-214ENST00000592106 NFIBO00712 420 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 NKRFO15226 690 aaKnown RBP eCLIP11.88□□□□□ -0.51
VMP1-214ENST00000592106 FOSL2P15408 326 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 SMPD1P17405 629 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 CALML3P27482 149 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 EPHB4P54760 987 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 ITGA7Q13683 1181 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 IMMTQ16891 758 aaKnown RBP11.88□□□□□ -0.51
VMP1-214ENST00000592106 ASPRV1Q53RT3 343 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 DGKHQ86XP1 1220 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 TBC1D10CQ8IV04 446 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
VMP1-214ENST00000592106 DNERQ8NFT8 737 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 OR6J1Q8NGC5 347 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
VMP1-214ENST00000592106 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 MAF1Q9H063 256 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 HIPK3Q9H422 1215 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
VMP1-214ENST00000592106 CTNNA3Q9UI47 895 aa11.88□□□□□ -0.51
VMP1-214ENST00000592106 NEDD4P46934 1319 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 CTAGE5O15320 804 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 CD4P01730 458 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 SNHG28P0DPA3 235 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 DNAJB2P25686 324 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 NUCB1Q02818 461 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 DUSP28Q4G0W2 176 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 CWC27Q6UX04 472 aaKnown RBP11.87□□□□□ -0.51
VMP1-214ENST00000592106 SLC30A10Q6XR72 485 aa11.87□□□□□ -0.51
VMP1-214ENST00000592106 SLC43A3Q8NBI5 491 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms