RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 ASB2Q96Q27 587 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 CYP46A1Q9Y6A2 500 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 LAMA4Q16363 1823 aa18.06■□□□□ 0.48
CXXC1-217ENST00000592078 LAMA2P24043 3122 aaKnown RBP18.05■□□□□ 0.48
CXXC1-217ENST00000592078 B4E1Z4 1266 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 KDM4AO75164 1064 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 CD4P01730 458 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 CSF2RAP15509 400 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 ZNF365Q70YC5 407 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 CYB5R4Q7L1T6 521 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 ARMCX2Q7L311 632 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 RALYLQ86SE5 291 aaKnown RBP18.05■□□□□ 0.48
CXXC1-217ENST00000592078 CPXCR1Q8N123 301 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 SLC43A3Q8NBI5 491 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 NEDD1Q8NHV4 660 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 IGDCC4Q8TDY8 1250 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 ANKS1AQ92625 1134 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.05■□□□□ 0.48
CXXC1-217ENST00000592078 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 RIPK3Q9Y572 518 aa18.05■□□□□ 0.48
CXXC1-217ENST00000592078 IGKV6D-41A0A0C4DH26 115 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 PRDM1O75626 825 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 TTLL1O95922 423 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 PFKMP08237 780 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 TNFAIP2Q03169 654 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 C16orf59Q7L2K0 433 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 FAM160B2Q86V87 743 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 KIFC2Q96AC6 838 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 TMEM87BQ96K49 555 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 AP5M1Q9H0R1 490 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 ACAD9Q9H845 621 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 PLIN4Q96Q06 1357 aa18.04■□□□□ 0.48
CXXC1-217ENST00000592078 LOC102724159A0A0B4J2E5 919 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 PLA2G6O60733 806 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 NEK4P51957 841 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 EVCP57679 992 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 TFAP4Q01664 338 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 PWP2Q15269 919 aaKnown RBP18.03■□□□□ 0.48
CXXC1-217ENST00000592078 CCDC178Q5BJE1 867 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 IQSEC1Q6DN90 963 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 STK11IPQ8N1F8 1099 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 SNX21Q969T3 373 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 UPF3BQ9BZI7 483 aaKnown RBP18.03■□□□□ 0.48
CXXC1-217ENST00000592078 PDRG1Q9NUG6 133 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 MTMR4Q9NYA4 1195 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 TTC28Q96AY4 2481 aa18.03■□□□□ 0.48
CXXC1-217ENST00000592078 PRC1O43663 620 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 RANBP6O60518 1105 aaKnown RBP18.02■□□□□ 0.48
CXXC1-217ENST00000592078 SUPT20HL2P0C7V6 817 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 BMP3P12645 472 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 CPA1P15085 419 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 COL9A1P20849 921 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 LIFRP42702 1097 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 STAT2P52630 851 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 SEC23AQ15436 765 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 CCDC144CPQ8IYA2 1237 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 LENG1Q96BZ8 264 aaPredicted RBP18.02■□□□□ 0.48
CXXC1-217ENST00000592078 HIPK3Q9H422 1215 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 PRDM12Q9H4Q4 367 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 RAVER2Q9HCJ3 691 aaKnown RBP18.02■□□□□ 0.48
CXXC1-217ENST00000592078 IL17RBQ9NRM6 502 aa18.02■□□□□ 0.48
CXXC1-217ENST00000592078 RBM19Q9Y4C8 960 aaKnown RBP18.02■□□□□ 0.48
CXXC1-217ENST00000592078 GREB1LQ9C091 1923 aaPredicted RBP18.02■□□□□ 0.47
CXXC1-217ENST00000592078 SLC4A3P48751 1232 aa18.01■□□□□ 0.47
CXXC1-217ENST00000592078 ITGA7Q13683 1181 aa18.01■□□□□ 0.47
CXXC1-217ENST00000592078 RRP12Q5JTH9 1297 aaKnown RBP18.01■□□□□ 0.47
CXXC1-217ENST00000592078 NOL8Q76FK4 1167 aaKnown RBP18.01■□□□□ 0.47
CXXC1-217ENST00000592078 DGKHQ86XP1 1220 aa18.01■□□□□ 0.47
CXXC1-217ENST00000592078 TMTC2Q8N394 836 aa18.01■□□□□ 0.47
CXXC1-217ENST00000592078 FAM133AQ8N9E0 248 aa18.01■□□□□ 0.47
CXXC1-217ENST00000592078 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
CXXC1-217ENST00000592078 NUP88Q99567 741 aaPredicted RBP18.01■□□□□ 0.47
CXXC1-217ENST00000592078 PPP1R12CQ9BZL4 782 aa18.01■□□□□ 0.47
CXXC1-217ENST00000592078 VCANP13611 3396 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 MYADML2A6NDP7 307 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 TSPY2A6NKD2 308 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
CXXC1-217ENST00000592078 TOB2Q14106 344 aaPredicted RBP18■□□□□ 0.47
CXXC1-217ENST00000592078 RCSD1Q6JBY9 416 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 SGMS1Q86VZ5 419 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 IQCA1Q86XH1 822 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 GMCL1Q96IK5 515 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 ZSCAN10Q96SZ4 725 aaPredicted RBP18■□□□□ 0.47
CXXC1-217ENST00000592078 C1QTNF1Q9BXJ1 281 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 KATNBL1Q9H079 304 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 TOMM22Q9NS69 142 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 CXXC1Q9P0U4 656 aaPredicted RBP18■□□□□ 0.47
CXXC1-217ENST00000592078 PNMA2Q9UL42 364 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 PCDHA11Q9Y5I1 949 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 SLC4A7Q9Y6M7 1214 aa18■□□□□ 0.47
CXXC1-217ENST00000592078 TSPY3P0CV98 308 aa17.99■□□□□ 0.47
CXXC1-217ENST00000592078 TSPY8P0CW00 308 aa17.99■□□□□ 0.47
CXXC1-217ENST00000592078 IGFBP4P22692 258 aa17.99■□□□□ 0.47
CXXC1-217ENST00000592078 MCM2P49736 904 aa17.99■□□□□ 0.47
CXXC1-217ENST00000592078 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
CXXC1-217ENST00000592078 FSCN1Q16658 493 aaKnown RBP17.99■□□□□ 0.47
CXXC1-217ENST00000592078 SLFN13Q68D06 897 aa17.99■□□□□ 0.47
CXXC1-217ENST00000592078 Q6ZUG5 572 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms