RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 SCN5AQ14524 2016 aa18.88■□□□□ 0.61
DDX39A-216ENST00000591275 NMT2O60551 498 aa18.87■□□□□ 0.61
DDX39A-216ENST00000591275 SLC3A2P08195 630 aaKnown RBP18.87■□□□□ 0.61
DDX39A-216ENST00000591275 BMP1P13497 986 aa18.87■□□□□ 0.61
DDX39A-216ENST00000591275 KCNQ1P51787 676 aa18.87■□□□□ 0.61
DDX39A-216ENST00000591275 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
DDX39A-216ENST00000591275 RCSD1Q6JBY9 416 aa18.87■□□□□ 0.61
DDX39A-216ENST00000591275 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
DDX39A-216ENST00000591275 INCENPQ9NQS7 918 aa18.87■□□□□ 0.61
DDX39A-216ENST00000591275 TNKSO95271 1327 aa18.86■□□□□ 0.61
DDX39A-216ENST00000591275 PLA2G6O60733 806 aa18.86■□□□□ 0.61
DDX39A-216ENST00000591275 CA3P07451 260 aa18.86■□□□□ 0.61
DDX39A-216ENST00000591275 MYL3P08590 195 aa18.86■□□□□ 0.61
DDX39A-216ENST00000591275 PPP1R13LQ8WUF5 828 aa18.86■□□□□ 0.61
DDX39A-216ENST00000591275 TSPY2A6NKD2 308 aa18.85■□□□□ 0.61
DDX39A-216ENST00000591275 CTDSPL2Q05D32 466 aa18.85■□□□□ 0.61
DDX39A-216ENST00000591275 BAATQ14032 418 aaPredicted RBP18.85■□□□□ 0.61
DDX39A-216ENST00000591275 CCDC96Q2M329 555 aa18.85■□□□□ 0.61
DDX39A-216ENST00000591275 DUSP28Q4G0W2 176 aa18.85■□□□□ 0.61
DDX39A-216ENST00000591275 TMEM67Q5HYA8 995 aa18.85■□□□□ 0.61
DDX39A-216ENST00000591275 IL17RBQ9NRM6 502 aa18.85■□□□□ 0.61
DDX39A-216ENST00000591275 SUPT20HL2P0C7V6 817 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 PLA2G5P39877 138 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 PURAQ00577 322 aaKnown RBP18.84■□□□□ 0.61
DDX39A-216ENST00000591275 LRRFIP1Q32MZ4 808 aaKnown RBP18.84■□□□□ 0.61
DDX39A-216ENST00000591275 FAM47CQ5HY64 1035 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 KRT40Q6A162 431 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 MORC4Q8TE76 937 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 WDR11Q9BZH6 1224 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 POLR3EQ9NVU0 708 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 MTCH2Q9Y6C9 303 aa18.84■□□□□ 0.61
DDX39A-216ENST00000591275 EPOPA6NHQ4 379 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 GTPBP6O43824 516 aaPredicted RBP18.83■□□□□ 0.6
DDX39A-216ENST00000591275 ICAM1P05362 532 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 PFKMP08237 780 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 SLC16A2P36021 539 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 ALDH5A1P51649 535 aaPredicted RBP18.83■□□□□ 0.6
DDX39A-216ENST00000591275 AAK1Q2M2I8 961 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 TTBK2Q6IQ55 1244 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 FAM122AQ96E09 287 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 FSD1Q9BTV5 496 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
DDX39A-216ENST00000591275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
DDX39A-216ENST00000591275 PTPDC1A2A3K4 754 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 NFIBO00712 420 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 ERC2O15083 957 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 ARHGEF15O94989 841 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 CPT1AP50416 773 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 NBPF20Q3BBV1 942 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 PPP4R3BQ5MIZ7 849 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 OR6J1Q8NGC5 347 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 MTG1Q9BT17 334 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-216ENST00000591275 GPHNQ9NQX3 736 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-216ENST00000591275 ADD3Q9UEY8 706 aaKnown RBP18.82■□□□□ 0.6
DDX39A-216ENST00000591275 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
DDX39A-216ENST00000591275 FOXP2O15409 715 aa18.81■□□□□ 0.6
DDX39A-216ENST00000591275 RANBP6O60518 1105 aaKnown RBP18.81■□□□□ 0.6
DDX39A-216ENST00000591275 ACTN1P12814 892 aa18.81■□□□□ 0.6
DDX39A-216ENST00000591275 ZMYM1Q5SVZ6 1142 aa18.81■□□□□ 0.6
DDX39A-216ENST00000591275 TET1Q8NFU7 2136 aa18.81■□□□□ 0.6
DDX39A-216ENST00000591275 ARNTL2Q8WYA1 636 aa18.81■□□□□ 0.6
DDX39A-216ENST00000591275 RANBP17Q9H2T7 1088 aaKnown RBP18.81■□□□□ 0.6
DDX39A-216ENST00000591275 BRWD1Q9NSI6 2320 aa18.81■□□□□ 0.6
DDX39A-216ENST00000591275 SCN10AQ9Y5Y9 1956 aa18.81■□□□□ 0.6
DDX39A-216ENST00000591275 POU3F3P20264 500 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-216ENST00000591275 CALML3P27482 149 aa18.8■□□□□ 0.6
DDX39A-216ENST00000591275 SLC30A10Q6XR72 485 aa18.8■□□□□ 0.6
DDX39A-216ENST00000591275 OTUD7AQ8TE49 926 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-216ENST00000591275 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
DDX39A-216ENST00000591275 C1QTNF1Q9BXJ1 281 aa18.8■□□□□ 0.6
DDX39A-216ENST00000591275 FTOQ9C0B1 505 aaKnown RBP eCLIP18.8■□□□□ 0.6
DDX39A-216ENST00000591275 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-216ENST00000591275 CHMP4BP1P59074 171 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 TAP1Q03518 808 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 SYDE2Q5VT97 1194 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 RETREG2Q8NC44 543 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 DCAF4Q8WV16 495 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 COPS5Q92905 334 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 EPHX3Q9H6B9 360 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 GPCPD1Q9NPB8 672 aa18.79■□□□□ 0.6
DDX39A-216ENST00000591275 TANC1Q9C0D5 1861 aa18.78■□□□□ 0.6
DDX39A-216ENST00000591275 RBM47A0AV96 593 aaKnown RBP18.78■□□□□ 0.6
DDX39A-216ENST00000591275 IQCF3P0C7M6 154 aa18.78■□□□□ 0.6
DDX39A-216ENST00000591275 RFC2P35250 354 aa18.78■□□□□ 0.6
DDX39A-216ENST00000591275 PPP2R5BQ15173 497 aa18.78■□□□□ 0.6
DDX39A-216ENST00000591275 SPRED2Q7Z698 418 aa18.78■□□□□ 0.6
DDX39A-216ENST00000591275 HERC6Q8IVU3 1022 aa18.78■□□□□ 0.6
DDX39A-216ENST00000591275 TTC41PQ6P2S7 1318 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 TRIP12Q14669 1992 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-216ENST00000591275 PDE4DQ08499 809 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 BRDTQ58F21 947 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-216ENST00000591275 VPS53Q5VIR6 699 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 NFRKBQ6P4R8 1299 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 BTNL9Q6UXG8 535 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 RNF207Q6ZRF8 634 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 PHOSPHO2Q8TCD6 241 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 CLEC4DQ8WXI8 215 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 TOMM22Q9NS69 142 aa18.77■□□□□ 0.6
DDX39A-216ENST00000591275 NOD1Q9Y239 953 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms