RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 IQSEC1Q6DN90 963 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 TAPT1Q6NXT6 567 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 NOL8Q76FK4 1167 aaKnown RBP20.99■□□□□ 0.95
VAT1-208ENST00000590924 FBXO16Q8IX29 292 aaPredicted RBP20.99■□□□□ 0.95
VAT1-208ENST00000590924 FAM126BQ8IXS8 530 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 ESR2Q92731 530 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 VTI1AQ96AJ9 217 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 FAM161BQ96MY7 647 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 CNNM2Q9H8M5 875 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 VTA1Q9NP79 307 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 ADD3Q9UEY8 706 aaKnown RBP20.99■□□□□ 0.95
VAT1-208ENST00000590924 SCN10AQ9Y5Y9 1956 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 NEDD4P46934 1319 aa20.99■□□□□ 0.95
VAT1-208ENST00000590924 NFIBO00712 420 aa20.98■□□□□ 0.95
VAT1-208ENST00000590924 CABYRO75952 493 aa20.98■□□□□ 0.95
VAT1-208ENST00000590924 SMPD1P17405 629 aa20.98■□□□□ 0.95
VAT1-208ENST00000590924 BAATQ14032 418 aaPredicted RBP20.98■□□□□ 0.95
VAT1-208ENST00000590924 FSCN1Q16658 493 aaKnown RBP20.98■□□□□ 0.95
VAT1-208ENST00000590924 PURBQ96QR8 312 aaKnown RBP20.98■□□□□ 0.95
VAT1-208ENST00000590924 AP5M1Q9H0R1 490 aa20.98■□□□□ 0.95
VAT1-208ENST00000590924 Q9Y3F1 56 aa20.98■□□□□ 0.95
VAT1-208ENST00000590924 DDX49Q9Y6V7 483 aaKnown RBP20.98■□□□□ 0.95
VAT1-208ENST00000590924 WDR19Q8NEZ3 1342 aa20.98■□□□□ 0.95
VAT1-208ENST00000590924 TLR3O15455 904 aaKnown RBP20.97■□□□□ 0.95
VAT1-208ENST00000590924 ALDH5A1P51649 535 aaPredicted RBP20.97■□□□□ 0.95
VAT1-208ENST00000590924 GPATCH4Q5T3I0 446 aaKnown RBP20.97■□□□□ 0.95
VAT1-208ENST00000590924 MFSD5Q6N075 450 aa20.97■□□□□ 0.95
VAT1-208ENST00000590924 EEPD1Q7L9B9 569 aa20.97■□□□□ 0.95
VAT1-208ENST00000590924 KRT23Q9C075 422 aa20.97■□□□□ 0.95
VAT1-208ENST00000590924 PDGFCQ9NRA1 345 aa20.97■□□□□ 0.95
VAT1-208ENST00000590924 UNC80Q8N2C7 3258 aa20.97■□□□□ 0.95
VAT1-208ENST00000590924 A0A0C4DFX4 3053 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 SLC27A2O14975 620 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 CD4P01730 458 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 TSGA10IPQ3SY00 556 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 CREB3L3Q68CJ9 461 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 CXCL17Q6UXB2 119 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 DGKHQ86XP1 1220 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 SLC43A3Q8NBI5 491 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 CLEC4DQ8WXI8 215 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 USP26Q9BXU7 913 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 SEMA6BQ9H3T3 888 aa20.96■□□□□ 0.95
VAT1-208ENST00000590924 EYSQ5T1H1 3165 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 TMEM265A0A087WTH1 108 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 PTPDC1A2A3K4 754 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 DLL1O00548 723 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 DYNC1LI2O43237 492 aaPredicted RBP20.95■□□□□ 0.94
VAT1-208ENST00000590924 ZEB2O60315 1214 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 PTGS1P23219 599 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 TRDNQ13061 729 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 PPIGQ13427 754 aaKnown RBP eCLIP20.95■□□□□ 0.94
VAT1-208ENST00000590924 C8orf34Q49A92 452 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 SLC30A10Q6XR72 485 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 IQCA1Q86XH1 822 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 KCNB2Q92953 911 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 SEZ6LQ9BYH1 1024 aa20.95■□□□□ 0.94
VAT1-208ENST00000590924 MYH7BA7E2Y1 1941 aa20.94■□□□□ 0.94
VAT1-208ENST00000590924 HSPA4P34932 840 aa20.94■□□□□ 0.94
VAT1-208ENST00000590924 DUSP28Q4G0W2 176 aa20.94■□□□□ 0.94
VAT1-208ENST00000590924 CCDC178Q5BJE1 867 aa20.94■□□□□ 0.94
VAT1-208ENST00000590924 CDX2Q99626 313 aaPredicted RBP20.94■□□□□ 0.94
VAT1-208ENST00000590924 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.94■□□□□ 0.94
VAT1-208ENST00000590924 ZKSCAN3Q9BRR0 538 aa20.94■□□□□ 0.94
VAT1-208ENST00000590924 TTYH1Q9H313 450 aaPredicted RBP20.94■□□□□ 0.94
VAT1-208ENST00000590924 CUL9Q8IWT3 2517 aa20.94■□□□□ 0.94
VAT1-208ENST00000590924 E7EWF7 191 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 KDM4AO75164 1064 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 ITGA7Q13683 1181 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 TMEM63BQ5T3F8 832 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 RNF207Q6ZRF8 634 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 TMEM199Q8N511 208 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 GRIN2DO15399 1336 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 SCN5AQ14524 2016 aa20.93■□□□□ 0.94
VAT1-208ENST00000590924 TANC1Q9C0D5 1861 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 TRIP12Q14669 1992 aaPredicted RBP20.92■□□□□ 0.94
VAT1-208ENST00000590924 RBM47A0AV96 593 aaKnown RBP20.92■□□□□ 0.94
VAT1-208ENST00000590924 CALML3P27482 149 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 RPS6P62753 249 aaKnown RBP20.92■□□□□ 0.94
VAT1-208ENST00000590924 KRT32Q14532 448 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 PNMA1Q8ND90 353 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 DNERQ8NFT8 737 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 NCOA7Q8NI08 942 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 ANKS1AQ92625 1134 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 PPP1R12CQ9BZL4 782 aa20.92■□□□□ 0.94
VAT1-208ENST00000590924 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.91■□□□□ 0.94
VAT1-208ENST00000590924 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.91■□□□□ 0.94
VAT1-208ENST00000590924 B4E1Z4 1266 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 CSF2RAP15509 400 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 EDNRBP24530 442 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 TMEM240Q5SV17 173 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 RASIP1Q5U651 963 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 C16orf59Q7L2K0 433 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 MPHOSPH6Q99547 160 aaKnown RBP20.91■□□□□ 0.94
VAT1-208ENST00000590924 WDR11Q9BZH6 1224 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 MAF1Q9H063 256 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 ZSWIM5Q9P217 1185 aa20.91■□□□□ 0.94
VAT1-208ENST00000590924 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
VAT1-208ENST00000590924 GOLGA8HP0CJ92 632 aa20.9■□□□□ 0.94
VAT1-208ENST00000590924 PSRC1Q6PGN9 363 aaPredicted RBP20.9■□□□□ 0.94
VAT1-208ENST00000590924 RALYLQ86SE5 291 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms