RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 KLHDC9Q8NEP7 349 aa25.97■■□□□ 1.75
MBD3-208ENST00000590830 SYTL5Q8TDW5 730 aaPredicted RBP25.97■■□□□ 1.75
MBD3-208ENST00000590830 NR2E3Q9Y5X4 410 aa25.97■■□□□ 1.75
MBD3-208ENST00000590830 ALPK3Q96L96 1907 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 SYNRGQ9UMZ2 1314 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 MYADML2A6NDP7 307 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 KBTBD13C9JR72 458 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 CPA1P15085 419 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 PTGS1P23219 599 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 KRT32Q14532 448 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 FBXO16Q8IX29 292 aaPredicted RBP25.96■■□□□ 1.75
MBD3-208ENST00000590830 C7orf61Q8IZ16 206 aa25.96■■□□□ 1.75
MBD3-208ENST00000590830 PNMA6FA0A0J9YX94 578 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 PLEKHA8P1O95397 391 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 EDNRBP24530 442 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 ATN1P54259 1190 aaPredicted RBP25.95■■□□□ 1.74
MBD3-208ENST00000590830 CCSAPQ6IQ19 270 aaPredicted RBP25.95■■□□□ 1.74
MBD3-208ENST00000590830 RNF180Q86T96 592 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 SRBD1Q8N5C6 995 aaKnown RBP25.95■■□□□ 1.74
MBD3-208ENST00000590830 CTCFLQ8NI51 663 aaPredicted RBP25.95■■□□□ 1.74
MBD3-208ENST00000590830 PIBF1Q8WXW3 757 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 FERMT2Q96AC1 680 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 TAAR1Q96RJ0 339 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 MAF1Q9H063 256 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 BRPF3Q9ULD4 1205 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 PHF24Q9UPV7 400 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 PCDHA1Q9Y5I3 950 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 SLC12A7Q9Y666 1083 aa25.95■■□□□ 1.74
MBD3-208ENST00000590830 CEP290O15078 2479 aa25.94■■□□□ 1.74
MBD3-208ENST00000590830 LOC102724159A0A0B4J2E5 919 aa25.94■■□□□ 1.74
MBD3-208ENST00000590830 CTAGE5O15320 804 aa25.94■■□□□ 1.74
MBD3-208ENST00000590830 REC8O95072 547 aa25.94■■□□□ 1.74
MBD3-208ENST00000590830 TNFAIP2Q03169 654 aa25.94■■□□□ 1.74
MBD3-208ENST00000590830 PWP2Q15269 919 aaKnown RBP25.94■■□□□ 1.74
MBD3-208ENST00000590830 MCF2L2Q86YR7 1114 aa25.94■■□□□ 1.74
MBD3-208ENST00000590830 CMTR1Q8N1G2 835 aaKnown RBP25.94■■□□□ 1.74
MBD3-208ENST00000590830 DNERQ8NFT8 737 aa25.94■■□□□ 1.74
MBD3-208ENST00000590830 UPF3AQ9H1J1 476 aaKnown RBP25.94■■□□□ 1.74
MBD3-208ENST00000590830 GNEQ9Y223 722 aaKnown RBP25.94■■□□□ 1.74
MBD3-208ENST00000590830 SMPD1P17405 629 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 SMARCA1P28370 1054 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 KIF5BP33176 963 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 GJA9P57773 515 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 GHRHRQ02643 423 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 SLC39A5Q6ZMH5 540 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 SPZ1Q9BXG8 430 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 USP26Q9BXU7 913 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 VTA1Q9NP79 307 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 PCDH10Q9P2E7 1040 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 BAZ2BQ9UIF8 2168 aaKnown RBP25.93■■□□□ 1.74
MBD3-208ENST00000590830 DNAH12Q6ZR08 3092 aa25.93■■□□□ 1.74
MBD3-208ENST00000590830 HSD17B4P51659 736 aa25.92■■□□□ 1.74
MBD3-208ENST00000590830 IQSEC1Q6DN90 963 aa25.92■■□□□ 1.74
MBD3-208ENST00000590830 FANCBQ8NB91 859 aa25.92■■□□□ 1.74
MBD3-208ENST00000590830 JAKMIP1Q96N16 626 aaKnown RBP25.92■■□□□ 1.74
MBD3-208ENST00000590830 RBM47A0AV96 593 aaKnown RBP25.91■■□□□ 1.74
MBD3-208ENST00000590830 CFBP00751 764 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 CALM1P0DP23 149 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 CALM2P0DP24 149 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 CALM3P0DP25 149 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 NKX3-2P78367 333 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 KCNA10Q16322 511 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 APOA5Q6Q788 366 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 LZTS2Q9BRK4 669 aa25.91■■□□□ 1.74
MBD3-208ENST00000590830 ZMYND8Q9ULU4 1186 aaPredicted RBP25.91■■□□□ 1.74
MBD3-208ENST00000590830 HMGB1P09429 215 aaKnown RBP25.9■■□□□ 1.74
MBD3-208ENST00000590830 GNAQP50148 359 aa25.9■■□□□ 1.74
MBD3-208ENST00000590830 ACLYP53396 1101 aa25.9■■□□□ 1.74
MBD3-208ENST00000590830 PDE4DQ08499 809 aa25.9■■□□□ 1.74
MBD3-208ENST00000590830 MICU3Q86XE3 530 aa25.9■■□□□ 1.74
MBD3-208ENST00000590830 TSEN34Q9BSV6 310 aaKnown RBP25.9■■□□□ 1.74
MBD3-208ENST00000590830 COLQQ9Y215 455 aaPredicted RBP25.9■■□□□ 1.74
MBD3-208ENST00000590830 LRRC37A2A6NM11 1700 aa25.89■■□□□ 1.74
MBD3-208ENST00000590830 EPB41L2O43491 1005 aaKnown RBP25.89■■□□□ 1.74
MBD3-208ENST00000590830 C6orf222P0C671 652 aaPredicted RBP25.89■■□□□ 1.74
MBD3-208ENST00000590830 CST5P28325 142 aaPredicted RBP25.89■■□□□ 1.74
MBD3-208ENST00000590830 RTP1P59025 263 aa25.89■■□□□ 1.74
MBD3-208ENST00000590830 SNX17Q15036 470 aa25.89■■□□□ 1.74
MBD3-208ENST00000590830 TMTC3Q6ZXV5 915 aa25.89■■□□□ 1.74
MBD3-208ENST00000590830 NOL8Q76FK4 1167 aaKnown RBP25.89■■□□□ 1.74
MBD3-208ENST00000590830 RMDN3Q96TC7 470 aa25.89■■□□□ 1.74
MBD3-208ENST00000590830 A0A1W2PQ45 241 aaPredicted RBP25.88■■□□□ 1.73
MBD3-208ENST00000590830 A0A1W2PQY0 241 aa25.88■■□□□ 1.73
MBD3-208ENST00000590830 DYNC1LI2O43237 492 aaPredicted RBP25.88■■□□□ 1.73
MBD3-208ENST00000590830 SYN1P17600 705 aa25.88■■□□□ 1.73
MBD3-208ENST00000590830 HOXA13P31271 388 aaPredicted RBP25.88■■□□□ 1.73
MBD3-208ENST00000590830 BEX3Q00994 111 aa25.88■■□□□ 1.73
MBD3-208ENST00000590830 CCDC82Q8N4S0 544 aa25.88■■□□□ 1.73
MBD3-208ENST00000590830 NSUN6Q8TEA1 469 aaKnown RBP25.88■■□□□ 1.73
MBD3-208ENST00000590830 RRP36Q96EU6 259 aaKnown RBP25.88■■□□□ 1.73
MBD3-208ENST00000590830 WDR11Q9BZH6 1224 aa25.88■■□□□ 1.73
MBD3-208ENST00000590830 hCG_1642624A0A1W2PR95 340 aa25.87■■□□□ 1.73
MBD3-208ENST00000590830 GNASQ5JWF2 1037 aa25.87■■□□□ 1.73
MBD3-208ENST00000590830 CHRDL2Q6WN34 429 aa25.87■■□□□ 1.73
MBD3-208ENST00000590830 SYNE3Q6ZMZ3 975 aa25.87■■□□□ 1.73
MBD3-208ENST00000590830 Q6ZUG5 572 aa25.87■■□□□ 1.73
MBD3-208ENST00000590830 PRO3102Q9H379 93 aa25.87■■□□□ 1.73
MBD3-208ENST00000590830 FAM217BQ9NTX9 383 aaPredicted RBP25.87■■□□□ 1.73
MBD3-208ENST00000590830 MYH6P13533 1939 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 KLF18A0A0U1RQI7 1052 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms