RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 CCDC184Q52MB2 194 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 FAM47CQ5HY64 1035 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 NFRKBQ6P4R8 1299 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 KIAA1211Q6ZU35 1233 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 CERS3Q8IU89 383 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 PRPF38AQ8NAV1 312 aaKnown RBP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 CHST13Q8NET6 341 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 SP7Q8TDD2 431 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 RIPOR3Q96MK2 946 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 CTAGE1Q96RT6 745 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 NUP88Q99567 741 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 SLF1Q9BQI6 1058 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 RIOK1Q9BRS2 568 aaKnown RBP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 MTG1Q9BT17 334 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 SH2D4AQ9H788 454 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 POLR3EQ9NVU0 708 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 MCM9Q9NXL9 1143 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 CD207Q9UJ71 328 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 NCOR2Q9Y618 2525 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 BAHCC1Q9P281 2608 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 GVINP1Q7Z2Y8 2422 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 ASB14A6NK59 587 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 LINC01565O15544 149 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 SRGAP3O43295 1099 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 RAD21O60216 631 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 ZBED4O75132 1171 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 KDM4AO75164 1064 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 EYA4O95677 639 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 SELPP16109 830 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 COL9A2Q14055 689 aaPredicted RBP7.82□□□□□ -1.16
DNMT1-222ENST00000590619 IKBKEQ14164 716 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 DUSP28Q4G0W2 176 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 CCDC158Q5M9N0 1113 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 TTC39AQ5SRH9 613 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 TMEM192Q8IY95 271 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 SSH1Q8WYL5 1049 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 MSLNLQ96KJ4 702 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 SAMD11Q96NU1 681 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 DBNDD2Q9BQY9 259 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 IGFLR1Q9H665 355 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 KANSL2Q9H9L4 492 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 SWAP70Q9UH65 585 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 FBXO40Q9UH90 709 aa7.82□□□□□ -1.16
DNMT1-222ENST00000590619 COL4A4P53420 1690 aaPredicted RBP7.82□□□□□ -1.16
DNMT1-222ENST00000590619 USP17L12C9JPN9 530 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 USP17L21D6R901 530 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 TBX10O75333 385 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 IDH1O75874 414 aaKnown RBP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 PTPN11Q06124 597 aaPredicted RBP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 PUM1Q14671 1186 aaKnown RBP eCLIP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 PTGISQ16647 500 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 FBXO16Q8IX29 292 aaPredicted RBP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 TMEM105Q8N8V8 129 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 AFAP1L1Q8TED9 768 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 DHX38Q92620 1227 aaKnown RBP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 COL26A1Q96A83 441 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 ZNF512BQ96KM6 892 aaPredicted RBP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 CCDC17Q96LX7 622 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 ANTXR1Q9H6X2 564 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 SLC38A10Q9HBR0 1119 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 GPHNQ9NQX3 736 aaPredicted RBP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 HDAC5Q9UQL6 1122 aa7.81□□□□□ -1.16
DNMT1-222ENST00000590619 EP300Q09472 2414 aaPredicted RBP7.81□□□□□ -1.16
DNMT1-222ENST00000590619 CFAP47Q6ZTR5 3102 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 F5H6K3 240 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 GRM6O15303 877 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 EFCAB14O75071 495 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 PARNO95453 639 aaKnown RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 CKBP12277 381 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 ICAM3P32942 547 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 CDK8P49336 464 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 KLRC3Q07444 240 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 G3BP1Q13283 466 aaKnown RBP eCLIP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 GDF6Q6KF10 455 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 TRAF7Q6Q0C0 670 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 LRRC8DQ7L1W4 858 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 CAGE1Q8TC20 777 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 MORC4Q8TE76 937 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 RPGRIP1Q96KN7 1286 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 PURBQ96QR8 312 aaKnown RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 MEIS3Q99687 375 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 WDR11Q9BZH6 1224 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 DCP1AQ9NPI6 582 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 A1CFQ9NQ94 594 aaKnown RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 HOMER2Q9NSB8 354 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 CLEC1BQ9P126 229 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 RALYQ9UKM9 306 aaKnown RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 NOD1Q9Y239 953 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 KMT2EQ8IZD2 1858 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 VPS13AQ96RL7 3174 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 MCM3APO60318 1980 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 COL11A1P12107 1806 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-222ENST00000590619 MYH1P12882 1939 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 PTPRSQ13332 1948 aa7.8□□□□□ -1.16
DNMT1-222ENST00000590619 MAGEB6P1A0A0J9YX57 407 aa7.79□□□□□ -1.16
DNMT1-222ENST00000590619 RBM47A0AV96 593 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms