RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TTYH1Q9H313 450 aaPredicted RBP24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 PRDM6Q9NQX0 595 aa24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 SLC5A4Q9NY91 659 aa24.94■■□□□ 1.58
R3HDM4-206ENST00000590454 GOLGA8AA7E2F4 631 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 CALM1P0DP23 149 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 CALM2P0DP24 149 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 CALM3P0DP25 149 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 PDIA3P30101 505 aaKnown RBP24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 CDC27P30260 824 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 STAT3P40763 770 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 SLC4A3P48751 1232 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 C1orf53Q5VUE5 145 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 NOL8Q76FK4 1167 aaKnown RBP24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 SHCBP1Q8NEM2 672 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 PDLIM7Q9NR12 457 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 LTBP2Q14767 1821 aa24.93■■□□□ 1.58
R3HDM4-206ENST00000590454 FOSL2P15408 326 aa24.92■■□□□ 1.58
R3HDM4-206ENST00000590454 KIF5BP33176 963 aa24.92■■□□□ 1.58
R3HDM4-206ENST00000590454 ADCYAP1R1P41586 468 aa24.92■■□□□ 1.58
R3HDM4-206ENST00000590454 SNRNP48Q6IEG0 339 aaKnown RBP24.92■■□□□ 1.58
R3HDM4-206ENST00000590454 SYMPKQ92797 1274 aaKnown RBP24.92■■□□□ 1.58
R3HDM4-206ENST00000590454 TPCN1Q9ULQ1 816 aa24.92■■□□□ 1.58
R3HDM4-206ENST00000590454 CTDP1Q9Y5B0 961 aaPredicted RBP24.92■■□□□ 1.58
R3HDM4-206ENST00000590454 TRIM43BA6NCK2 446 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 ATP2A1O14983 1001 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 DHX16O60231 1041 aaKnown RBP24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 ERCC3P19447 782 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 ADD1P35611 737 aaKnown RBP24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 CDC37Q16543 378 aaPredicted RBP24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 RTN1Q16799 776 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 TMTC3Q6ZXV5 915 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 SH3RF1Q7Z6J0 888 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 RIOX2Q8IUF8 465 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 CCDC82Q8N4S0 544 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 PIBF1Q8WXW3 757 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 TRIM43Q96BQ3 446 aaPredicted RBP24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 RIOX1Q9H6W3 641 aa24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 NCOA5Q9HCD5 579 aaKnown RBP24.91■■□□□ 1.58
R3HDM4-206ENST00000590454 COBLO75128 1261 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 FDX1P10109 184 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 METAP2P50579 478 aaKnown RBP eCLIP24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 CCT2P78371 535 aaKnown RBP24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 STK3Q13188 491 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 LRRC41Q15345 812 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 QRICH1Q2TAL8 776 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 NCAPG2Q86XI2 1143 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 FERMT2Q96AC1 680 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 MTMR8Q96EF0 704 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 PIGSQ96S52 555 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 TEX13BQ9BXU2 312 aa24.9■■□□□ 1.58
R3HDM4-206ENST00000590454 TMEM265A0A087WTH1 108 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 PPP1R11O60927 126 aaPredicted RBP24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 LARGE1O95461 756 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 ICAM1P05362 532 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 OAZ1P54368 228 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 FUT2Q10981 343 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 PRAMEF19Q5SWL8 479 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 MROH8Q9H579 483 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 HOMER2Q9NSB8 354 aa24.89■■□□□ 1.58
R3HDM4-206ENST00000590454 NID2Q14112 1375 aa24.89■■□□□ 1.57
R3HDM4-206ENST00000590454 hCG_1642624A0A1W2PR95 340 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 RCAN1P53805 252 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 TLE2Q04725 743 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 RABEP1Q15276 862 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 HOMER1Q86YM7 354 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 ABRAQ8N0Z2 381 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 ZNF274Q96GC6 653 aaPredicted RBP24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 SPZ1Q9BXG8 430 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 CCPG1Q9ULG6 757 aa24.88■■□□□ 1.57
R3HDM4-206ENST00000590454 DTNBO60941 627 aa24.87■■□□□ 1.57
R3HDM4-206ENST00000590454 PPFIA3O75145 1194 aa24.87■■□□□ 1.57
R3HDM4-206ENST00000590454 ALAS1P13196 640 aa24.87■■□□□ 1.57
R3HDM4-206ENST00000590454 GNAQP50148 359 aa24.87■■□□□ 1.57
R3HDM4-206ENST00000590454 RNPC3Q96LT9 517 aaKnown RBP24.87■■□□□ 1.57
R3HDM4-206ENST00000590454 RBM28Q9NW13 759 aaKnown RBP24.87■■□□□ 1.57
R3HDM4-206ENST00000590454 DNAH12Q6ZR08 3092 aa24.87■■□□□ 1.57
R3HDM4-206ENST00000590454 CNTNAP5Q8WYK1 1306 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 ZNF236Q9UL36 1845 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 CD2BP2O95400 341 aaKnown RBP24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 SLC25A27O95847 323 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 ME3Q16798 604 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 USH1GQ495M9 461 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 MUM1L1Q5H9M0 696 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 MAML3Q96JK9 1138 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 LZTS2Q9BRK4 669 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 PHF24Q9UPV7 400 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 MYH6P13533 1939 aa24.86■■□□□ 1.57
R3HDM4-206ENST00000590454 ZBTB5O15062 677 aa24.85■■□□□ 1.57
R3HDM4-206ENST00000590454 CLTBP09497 229 aa24.85■■□□□ 1.57
R3HDM4-206ENST00000590454 ANKRD1Q15327 319 aa24.85■■□□□ 1.57
R3HDM4-206ENST00000590454 TRERF1Q96PN7 1200 aa24.85■■□□□ 1.57
R3HDM4-206ENST00000590454 RNF146Q9NTX7 359 aa24.85■■□□□ 1.57
R3HDM4-206ENST00000590454 NRBP1Q9UHY1 535 aa24.85■■□□□ 1.57
R3HDM4-206ENST00000590454 SMARCA1P28370 1054 aa24.84■■□□□ 1.57
R3HDM4-206ENST00000590454 SCRN1Q12765 414 aa24.84■■□□□ 1.57
R3HDM4-206ENST00000590454 NTRK3Q16288 839 aa24.84■■□□□ 1.57
R3HDM4-206ENST00000590454 NECAB1Q8N987 351 aa24.84■■□□□ 1.57
R3HDM4-206ENST00000590454 XPNPEP3Q9NQH7 507 aa24.84■■□□□ 1.57
R3HDM4-206ENST00000590454 LAMA2P24043 3122 aaKnown RBP24.84■■□□□ 1.57
R3HDM4-206ENST00000590454 PFKFB2O60825 505 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms