RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 ADCY6O43306 1168 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 SNAP25P60880 206 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 SMAD3P84022 425 aaKnown RBP8.89□□□□□ -0.99
NPC1-208ENST00000590301 FPGSQ05932 587 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 FAAP100Q0VG06 881 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 TRAF1Q13077 416 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 FSCN1Q16658 493 aaKnown RBP8.89□□□□□ -0.99
NPC1-208ENST00000590301 TTC22Q5TAA0 569 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 TAPT1Q6NXT6 567 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 RNF207Q6ZRF8 634 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 RASGRP2Q7LDG7 609 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 SH3RF1Q7Z6J0 888 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 TLK2Q86UE8 772 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 ENAHQ8N8S7 591 aaPredicted RBP8.89□□□□□ -0.99
NPC1-208ENST00000590301 CLEC4DQ8WXI8 215 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 VTI1AQ96AJ9 217 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 CHMP4CQ96CF2 233 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 TBX21Q9UL17 535 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 GNEQ9Y223 722 aaKnown RBP8.89□□□□□ -0.99
NPC1-208ENST00000590301 STXBP5LQ9Y2K9 1186 aa8.89□□□□□ -0.99
NPC1-208ENST00000590301 SZT2Q5T011 3432 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 TNKSO95271 1327 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 ABCB11O95342 1321 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 TMEM265A0A087WTH1 108 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 RBM47A0AV96 593 aaKnown RBP8.88□□□□□ -0.99
NPC1-208ENST00000590301 PTPDC1A2A3K4 754 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 MYADML2A6NDP7 307 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 B4E1Z4 1266 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 NKRFO15226 690 aaKnown RBP eCLIP8.88□□□□□ -0.99
NPC1-208ENST00000590301 CTAGE5O15320 804 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 TIMP1P01033 207 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 SMPD1P17405 629 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 EDNRBP24530 442 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 ALDH5A1P51649 535 aaPredicted RBP8.88□□□□□ -0.99
NPC1-208ENST00000590301 TRDNQ13061 729 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 SHHQ15465 462 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 DUSP28Q4G0W2 176 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 BRDTQ58F21 947 aaPredicted RBP8.88□□□□□ -0.99
NPC1-208ENST00000590301 MFSD5Q6N075 450 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 MCF2L2Q86YR7 1114 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 FBXO16Q8IX29 292 aaPredicted RBP8.88□□□□□ -0.99
NPC1-208ENST00000590301 SLC43A3Q8NBI5 491 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 POLR3EQ9NVU0 708 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 MTMR10Q9NXD2 777 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 ZSWIM5Q9P217 1185 aa8.88□□□□□ -0.99
NPC1-208ENST00000590301 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 DYNC1LI2O43237 492 aaPredicted RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 KPNA6O60684 536 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 PARP1P09874 1014 aaKnown RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 GSPT1P15170 499 aaKnown RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 CHMLP26374 656 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 CALML3P27482 149 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 PDE4AP27815 886 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 CPT1AP50416 773 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 RPS6P62753 249 aaKnown RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 PDE4DQ08499 809 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 PPIGQ13427 754 aaKnown RBP eCLIP8.87□□□□□ -0.99
NPC1-208ENST00000590301 SART3Q15020 963 aaKnown RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 IFIT1BQ5T764 474 aaKnown RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 SLC30A10Q6XR72 485 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 KIAA1211Q6ZU35 1233 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 FAM126BQ8IXS8 530 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 ADGRF4Q8IZF3 695 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 TMEM199Q8N511 208 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 SCFD2Q8WU76 684 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 RNPC3Q96LT9 517 aaKnown RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 ZKSCAN3Q9BRR0 538 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 WDR11Q9BZH6 1224 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 MRPL11Q9Y3B7 192 aaKnown RBP8.87□□□□□ -0.99
NPC1-208ENST00000590301 DNAH12Q6ZR08 3092 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 PARP14Q460N5 1801 aa8.87□□□□□ -0.99
NPC1-208ENST00000590301 MYH8P13535 1937 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 ERICH2A1L162 156 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 CD4P01730 458 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 SUPT20HL2P0C7V6 817 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 GOLGA8HP0CJ92 632 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 ITGB8P26012 769 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 BEX3Q00994 111 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 ITGA7Q13683 1181 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 PPP2R5BQ15173 497 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 CDC37Q16543 378 aaPredicted RBP8.86□□□□□ -0.99
NPC1-208ENST00000590301 C9orf50Q5SZB4 431 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 ZNF697Q5TEC3 545 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 PSRC1Q6PGN9 363 aaPredicted RBP8.86□□□□□ -0.99
NPC1-208ENST00000590301 CXCL17Q6UXB2 119 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 EEPD1Q7L9B9 569 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 RALYLQ86SE5 291 aaKnown RBP8.86□□□□□ -0.99
NPC1-208ENST00000590301 FBXO11Q86XK2 927 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 SAMD3Q8N6K7 520 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 NSUN6Q8TEA1 469 aaKnown RBP8.86□□□□□ -0.99
NPC1-208ENST00000590301 IWS1Q96ST2 819 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 UBA5Q9GZZ9 404 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 GPHNQ9NQX3 736 aaPredicted RBP8.86□□□□□ -0.99
NPC1-208ENST00000590301 PDGFCQ9NRA1 345 aa8.86□□□□□ -0.99
NPC1-208ENST00000590301 MAP3K20Q9NYL2 800 aaKnown RBP8.86□□□□□ -0.99
NPC1-208ENST00000590301 KLRF2D3W0D1 207 aa8.85□□□□□ -0.99
NPC1-208ENST00000590301 SGSM2O43147 1006 aa8.85□□□□□ -0.99
NPC1-208ENST00000590301 DHX16O60231 1041 aaKnown RBP8.85□□□□□ -0.99
NPC1-208ENST00000590301 IRX5P78411 483 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms