RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 FAM184BQ9ULE4 1060 aa21.2■□□□□ 0.98
DDX39A-212ENST00000590260 RARBP10826 455 aa21.19■□□□□ 0.98
DDX39A-212ENST00000590260 ADCYAP1R1P41586 468 aa21.19■□□□□ 0.98
DDX39A-212ENST00000590260 GHRHRQ02643 423 aa21.19■□□□□ 0.98
DDX39A-212ENST00000590260 CCSAPQ6IQ19 270 aaPredicted RBP21.19■□□□□ 0.98
DDX39A-212ENST00000590260 EEPD1Q7L9B9 569 aa21.19■□□□□ 0.98
DDX39A-212ENST00000590260 HOMER1Q86YM7 354 aa21.19■□□□□ 0.98
DDX39A-212ENST00000590260 FBXO16Q8IX29 292 aaPredicted RBP21.19■□□□□ 0.98
DDX39A-212ENST00000590260 SRBD1Q8N5C6 995 aaKnown RBP21.19■□□□□ 0.98
DDX39A-212ENST00000590260 KLHDC9Q8NEP7 349 aa21.19■□□□□ 0.98
DDX39A-212ENST00000590260 AMNQ9BXJ7 453 aa21.19■□□□□ 0.98
DDX39A-212ENST00000590260 SENP6Q9GZR1 1112 aaPredicted RBP21.19■□□□□ 0.98
DDX39A-212ENST00000590260 CCDC69A6NI79 296 aa21.18■□□□□ 0.98
DDX39A-212ENST00000590260 NFXL1Q6ZNB6 911 aa21.18■□□□□ 0.98
DDX39A-212ENST00000590260 TMTC2Q8N394 836 aa21.18■□□□□ 0.98
DDX39A-212ENST00000590260 ARRDC4Q8NCT1 418 aa21.18■□□□□ 0.98
DDX39A-212ENST00000590260 TAAR1Q96RJ0 339 aa21.18■□□□□ 0.98
DDX39A-212ENST00000590260 SPZ1Q9BXG8 430 aa21.18■□□□□ 0.98
DDX39A-212ENST00000590260 USP26Q9BXU7 913 aa21.18■□□□□ 0.98
DDX39A-212ENST00000590260 DUSP11O75319 330 aaKnown RBP21.17■□□□□ 0.98
DDX39A-212ENST00000590260 APOA5Q6Q788 366 aa21.17■□□□□ 0.98
DDX39A-212ENST00000590260 UPF3AQ9H1J1 476 aaKnown RBP21.17■□□□□ 0.98
DDX39A-212ENST00000590260 GNEQ9Y223 722 aaKnown RBP21.17■□□□□ 0.98
DDX39A-212ENST00000590260 MRPL11Q9Y3B7 192 aaKnown RBP21.17■□□□□ 0.98
DDX39A-212ENST00000590260 PCDHA1Q9Y5I3 950 aa21.17■□□□□ 0.98
DDX39A-212ENST00000590260 PNMA6FA0A0J9YX94 578 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 REC8O95072 547 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 SMPD1P17405 629 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 HSD17B4P51659 736 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 NKX3-2P78367 333 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 KRT32Q14532 448 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 CTCFLQ8NI51 663 aaPredicted RBP21.16■□□□□ 0.98
DDX39A-212ENST00000590260 PIBF1Q8WXW3 757 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 JAKMIP1Q96N16 626 aaKnown RBP21.16■□□□□ 0.98
DDX39A-212ENST00000590260 FAM217BQ9NTX9 383 aaPredicted RBP21.16■□□□□ 0.98
DDX39A-212ENST00000590260 ADD3Q9UEY8 706 aaKnown RBP21.16■□□□□ 0.98
DDX39A-212ENST00000590260 PHF24Q9UPV7 400 aa21.16■□□□□ 0.98
DDX39A-212ENST00000590260 LOC102724159A0A0B4J2E5 919 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 EVI5O60447 810 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 MYCNP04198 464 aaPredicted RBP21.15■□□□□ 0.98
DDX39A-212ENST00000590260 SMARCA1P28370 1054 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 ATN1P54259 1190 aaPredicted RBP21.15■□□□□ 0.98
DDX39A-212ENST00000590260 GJA9P57773 515 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 FUT2Q10981 343 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 PWP2Q15269 919 aaKnown RBP21.15■□□□□ 0.98
DDX39A-212ENST00000590260 C7orf61Q8IZ16 206 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 FANCBQ8NB91 859 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 DNERQ8NFT8 737 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 FERMT2Q96AC1 680 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 MAF1Q9H063 256 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 VTA1Q9NP79 307 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 SLC12A7Q9Y666 1083 aa21.15■□□□□ 0.98
DDX39A-212ENST00000590260 RBM47A0AV96 593 aaKnown RBP21.14■□□□□ 0.97
DDX39A-212ENST00000590260 KBTBD13C9JR72 458 aa21.14■□□□□ 0.97
DDX39A-212ENST00000590260 EPB41L2O43491 1005 aaKnown RBP21.14■□□□□ 0.97
DDX39A-212ENST00000590260 CST5P28325 142 aaPredicted RBP21.14■□□□□ 0.97
DDX39A-212ENST00000590260 TNFAIP2Q03169 654 aa21.14■□□□□ 0.97
DDX39A-212ENST00000590260 SNX17Q15036 470 aa21.14■□□□□ 0.97
DDX39A-212ENST00000590260 TMTC3Q6ZXV5 915 aa21.14■□□□□ 0.97
DDX39A-212ENST00000590260 MICU3Q86XE3 530 aa21.14■□□□□ 0.97
DDX39A-212ENST00000590260 PRO3102Q9H379 93 aa21.14■□□□□ 0.97
DDX39A-212ENST00000590260 A0A1W2PQ45 241 aaPredicted RBP21.13■□□□□ 0.97
DDX39A-212ENST00000590260 A0A1W2PQY0 241 aa21.13■□□□□ 0.97
DDX39A-212ENST00000590260 hCG_1642624A0A1W2PR95 340 aa21.13■□□□□ 0.97
DDX39A-212ENST00000590260 CFBP00751 764 aa21.13■□□□□ 0.97
DDX39A-212ENST00000590260 HOXA13P31271 388 aaPredicted RBP21.13■□□□□ 0.97
DDX39A-212ENST00000590260 KIF5BP33176 963 aa21.13■□□□□ 0.97
DDX39A-212ENST00000590260 SLC39A5Q6ZMH5 540 aa21.13■□□□□ 0.97
DDX39A-212ENST00000590260 AGXT2Q9BYV1 514 aa21.13■□□□□ 0.97
DDX39A-212ENST00000590260 CNTNAP5Q8WYK1 1306 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 CALM1P0DP23 149 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 CALM2P0DP24 149 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 CALM3P0DP25 149 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 RPS6KB1P23443 525 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 CDC27P30260 824 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 BEX3Q00994 111 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 KCNA10Q16322 511 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 Q6ZUG5 572 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 RNF180Q86T96 592 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 MCF2L2Q86YR7 1114 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 LZTS2Q9BRK4 669 aa21.12■□□□□ 0.97
DDX39A-212ENST00000590260 ZMYND8Q9ULU4 1186 aaPredicted RBP21.12■□□□□ 0.97
DDX39A-212ENST00000590260 KLF18A0A0U1RQI7 1052 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 ARIH2O95376 493 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 HMGB1P09429 215 aaKnown RBP21.11■□□□□ 0.97
DDX39A-212ENST00000590260 C6orf222P0C671 652 aaPredicted RBP21.11■□□□□ 0.97
DDX39A-212ENST00000590260 SYN1P17600 705 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 ACLYP53396 1101 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 RTP1P59025 263 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 APOBRQ0VD83 1088 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 IQSEC1Q6DN90 963 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 BLOC1S2Q6QNY1 142 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 FBXL16Q8N461 479 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 CCDC82Q8N4S0 544 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 IL31RAQ8NI17 732 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 RMDN3Q96TC7 470 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 TSEN34Q9BSV6 310 aaKnown RBP21.11■□□□□ 0.97
DDX39A-212ENST00000590260 PXMP2Q9NR77 195 aa21.11■□□□□ 0.97
DDX39A-212ENST00000590260 COLQQ9Y215 455 aaPredicted RBP21.11■□□□□ 0.97
DDX39A-212ENST00000590260 NR2E3Q9Y5X4 410 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms